Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Marinobacter adhaerens HP15

 Score = 74.7 bits (182), Expect = 9e-18
 Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 19/289 (6%)

Query: 187 AAISWSFVF--MFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPG---FIAVLASGLMGS 241
           A+ SWS     MFI  G  L R+ + +   D+ +  A  + G PG    + +L+ G+  +
Sbjct: 55  ASTSWSLTALPMFIWMGEVLFRTRLSE---DLFKGLAPWMGGLPGKLLHVNILSCGIFAA 111

Query: 242 VSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQ 301
           VSGSS A   + G +T+P +K  G+  + A G  A + T G L+PP +    + +A+   
Sbjct: 112 VSGSSAATAATIGRMTLPELKAQGYSDKMAVGTLAGSGTLGLLIPPSIILIVYGVAAEVS 171

Query: 302 IPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQEPF-MKVLLSGWHNLIPLA 360
           I  + I     +P L+       +  I AK    Q+ TT +E     V +     L+P+ 
Sbjct: 172 IGRLFIAGA--LPGLMLVAMFMGYTMIWAKLNKDQLPTTKKENLAFSVKIKALKMLLPIV 229

Query: 361 VLVTLLV----VGF-TPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTA 415
            L+  ++     GF TPT AA L +   ++ +  +    +  ++  ++L    K+     
Sbjct: 230 GLIIFVLGSIYTGFATPTEAAALGVFGALIIA--AATGSLSIQSFKDSLLGAVKSSCMIG 287

Query: 416 VLLVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLG 464
           ++LVG   +   +   GI    +  I + +      +LV +T+  ++LG
Sbjct: 288 LILVGAHFLTLAMGFLGIPRELAAWIGSMSLSP-FELLVGLTVLFVLLG 335