Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 867 a.a., TRAP-type uncharacterized transport system, fused permease component from Marinobacter adhaerens HP15

 Score =  241 bits (614), Expect = 1e-67
 Identities = 188/675 (27%), Positives = 336/675 (49%), Gaps = 75/675 (11%)

Query: 2   SNSVEQELEKFEVPTRTRFGWVTRTISVLCVLLSLAHIWFNT-------LSTWSELWISA 54
           S++V+Q L+  E   R   G+    + ++ ++ SL  +W  +        + ++     +
Sbjct: 15  SSNVDQILQT-ETGGRATSGYAAVILFIVPLVWSLFQLWIASPLPYIFNFAIFNSTEARS 73

Query: 55  IHFAGFAMICALWYPALPRWRGSKVALA--FDVLLALLALACLIYLMLAEDALYERGVKF 112
           IH A FA+  A  + A P  +G  V +   +D +LAL+A  C  YL +  + L  R    
Sbjct: 74  IHLA-FAVFLA--FSAFPMIKGRHVNIVPIYDWILALVAAFCASYLYVFYEELSTRPGAP 130

Query: 113 VTSDWVFSILAILIVMEMIRRTMGWFIPTLILICLTYVSVWGKWAGGIFHFPGLSAETLL 172
           +T D   +++ +++++E  RR++G  +  +  + +TY S+ G +   +    G+S   L 
Sbjct: 131 ITQDLWVALIGLVLLLEATRRSLGLPLTIVAAVFITY-SIAGPYMPDVIAHKGVSLSKLA 189

Query: 173 YRSFYSSEGMFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIA 232
              +  +EG+FG    +S SFVF+F+LFGA L R+G G+Y + V+ A  G + GGP   A
Sbjct: 190 SHQWLGTEGVFGVALGVSTSFVFLFVLFGALLERAGAGNYFIKVAYAMLGHMRGGPAKAA 249

Query: 233 VLASGLMGSVSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAG 292
           V++SGL G +SGSS+AN V+TG  TIP+MK+ GFPA  A  VE AAST GQL PP+MGA 
Sbjct: 250 VVSSGLSGVISGSSIANVVTTGTFTIPLMKRVGFPATKAGAVEVAASTNGQLTPPIMGAA 309

Query: 293 AFIMASYTQIPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSG 352
           AF+M  Y  I Y++++  + +PA+I ++++ + V +EA ++ +Q +    +P +   L  
Sbjct: 310 AFLMVEYVGISYLEVIKHAILPAMISYVALIYIVHLEACKLNMQGIERLNKPTLAQRLLN 369

Query: 353 WHNLIPLAVLVTLLV---VGFTPTY--AAGLSILSVIV----------ASWFSKNHKMGP 397
           W  ++    ++TL V   VG+T T    A + +L+ ++          A+ F +  +  P
Sbjct: 370 WVVILIGLSVLTLAVYYGVGWTKTLFGEAAMWVLAPLLVLIYVGLVGYATRFPELEEDDP 429

Query: 398 KAIIEALEQGAKNMATTAVLLVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLV--- 454
           +  +  L      + T    L+ + +++  ++        S     WA   ++ ++V   
Sbjct: 430 EKDMGELPPVGPTVKTGLYFLLPVVVLVWCLTVERFSPQLSAF---WATLFMIFIVVTQR 486

Query: 455 --------------------------LITLASLVLGMGLPVTAAYIVLGTLSAPALYKLL 488
                                     L T A  ++G+G+    A IV+GT++   +  ++
Sbjct: 487 PLKAFFYKHGNFLGEFKDGVFDLAHSLATGARNMVGIGVATATAGIVVGTVTLTGIGLVM 546

Query: 489 AESQLVDLMVSGQLPEQAKAIFMLAAPDQLSL-LNAPMAAEKAHELISLVPADFVETLLQ 547
            E   V+ +  G L      + ML     +SL L   +     + ++S + A  + TL  
Sbjct: 547 TE--FVEFLSGGNL------LLMLIFTAIISLILGMGLPTTANYIVVSTLMAPVIVTLGA 598

Query: 548 QSLGLEAIGLALLSAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGFTAWKIAKG 607
           Q+     + + L++ HL +F+    ++ TPPV L A+AAA I+   P+RTG   +     
Sbjct: 599 QN----GLIVPLIAVHLFVFYFGILADDTPPVGLAAYAAAAISGADPIRTGIQGFTYDIR 654

Query: 608 LYLVPVLIAY-TQLI 621
             ++P +  + TQL+
Sbjct: 655 TAILPFMFIFNTQLL 669