Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP dicarboxylate transporter, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 69/294 (23%), Positives = 129/294 (43%), Gaps = 10/294 (3%)

Query: 196 MFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGV 255
           MFI  G    RSGV   +++ + A  G + GG    +++   ++G +SGS  A+  +  +
Sbjct: 59  MFIFAGMVFERSGVALRLVNFTVALVGPLRGGLAIASIMVCMVLGGISGSGPADAAAVAM 118

Query: 256 ITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMAS--YTQIPYVDIVAVSFI 313
           + IP M  AG+P  F+AG+ AAA +   L+PP +   AFI+ S    Q     + A   I
Sbjct: 119 VMIPGMAAAGYPKAFSAGLIAAAGSTAILIPPSI---AFILYSVLVPQASVPALFAAGLI 175

Query: 314 PALIYFLSVAFFVRIEAKRMGVQIV---TTSQEPFMKVLLSGWHNLIPLAVLVTLLVVGF 370
           P  +  +++       + R G  +V    +     +    + W  L P+ +L  +    F
Sbjct: 176 PGFLAGIALIIPAWALSVRHGFGLVGDDASCGSILIAFKEAIWGLLAPVIILGGIRSGYF 235

Query: 371 TPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINVIST 430
           TPT AA  ++   +   +F     +  + I E L + A+  A   +++    +     ST
Sbjct: 236 TPTEAAVAAVFYGLFVGFF-VYRTLTLRGIYELLVESAEVSAVVMMIIALSSVFAWAGST 294

Query: 431 TGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPAL 484
            G        +   +  + +T+L ++ L  ++ GM L   +   +   +  P +
Sbjct: 295 LGAFEAMGNALIGISTSETMTLLAVV-LVLIIAGMFLDGVSILFIFIPILLPVM 347