Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  104 bits (259), Expect = 1e-26
 Identities = 93/365 (25%), Positives = 171/365 (46%), Gaps = 31/365 (8%)

Query: 137 WFIPTLILICLTYVSVWGKWAGGIFHFPGLSAE--------TLLYRSFYSSEGMFGSIAA 188
           WF+P  +L  +  + V+     G+   PGL           TLLYR+ Y+    F  +A 
Sbjct: 4   WFLPLFLLFLMIGLPVFF----GLLAAPGLLLWLNGQERDITLLYRNVYNGMDSFPLMA- 58

Query: 189 ISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVA 248
                +  F+L G  + R G+   +++ ++A  G   GG   + +L+S L   +SGS+VA
Sbjct: 59  -----IPFFMLAGELMNRGGITLRLVEFAQALMGHFRGGLAHVNILSSMLFAGLSGSAVA 113

Query: 249 NTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYV-DI 307
           +T + G + IP M+K G+  RFAA + AA+S  G ++PP   +G  I+ +Y     V  +
Sbjct: 114 DTSALGSMLIPAMEKQGYTRRFAAAITAASSVIGPIIPP---SGIMIIYAYVMGESVAAL 170

Query: 308 VAVSFIPALIYFLSVAFFVRIEAKRMGVQIV---TTSQEPFMKVLLSGWHNLIPLAVLVT 364
                +P ++  + +   V++ A +    +    TT  +     L + +  + P+ +L  
Sbjct: 171 FLAGIVPGILVGVGLMGVVKLMADKYDFPVASAKTTWGQRGQASLKAFFPLMTPVIILGG 230

Query: 365 LLVVGFTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLV 424
           +L   FTPT AA +++   ++  +F     M    + +  +   +   T+AV+L+ +G  
Sbjct: 231 ILAGVFTPTEAAAVAVAYALIIGFF----VMRTLKVSDLPDILGRAGITSAVVLLLVGAA 286

Query: 425 INVISTTGIGNTFSLMINNW--ANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAP 482
           +   +   +     +M +     + + L +L+LI L   V+GM L    A I+LG +  P
Sbjct: 287 MAFKTVVSLSYAPQIMADFMLSLSENPLILLLLINLLLFVVGMFLDAGPAIIILGPILGP 346

Query: 483 ALYKL 487
               L
Sbjct: 347 IFVDL 351