Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 80.5 bits (197), Expect = 2e-19
 Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 28/268 (10%)

Query: 183 FGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSV 242
           + + ++ S S V +F+L G F  +SG+   +   +    G   GG    AV A    G+V
Sbjct: 55  YDTFSSYSLSIVPLFLLMGQFATKSGMSAALFQAASDWLGHRKGGVAMAAVGACAGFGAV 114

Query: 243 SGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQI 302
            GSS+A   + G + +P MKK G+    + GV AA  T G L+PP       I A  TQ 
Sbjct: 115 CGSSLATASTMGQVALPEMKKRGYSDSLSTGVLAAGGTLGILIPP--SVILVIYAILTQQ 172

Query: 303 PYVDIVAVSFIPALI----YFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWHNLIP 358
             V +   + IP +I    Y L+VA +VR++         T  + P    + + W  + P
Sbjct: 173 NIVKMFIAALIPGIIAALGYMLTVAIYVRVKPD----AATTAPRIPMADRMRTLW-RIWP 227

Query: 359 LAVLVTLLVVG---------------FTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEA 403
           + V+  L++ G               FTPT  A +  ++  +  W +    +  K ++E+
Sbjct: 228 VVVIFGLVMGGIAGDWNWAQDGVQALFTPTEGAAVGAVATGIYGWATGG--LTWKGLLES 285

Query: 404 LEQGAKNMATTAVLLVGIGLVINVISTT 431
           + + A+  A    +++G  L  + ++ T
Sbjct: 286 ILETAQASAMIFFIVLGAQLFNSFLAFT 313