Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 71.2 bits (173), Expect = 1e-16
 Identities = 62/278 (22%), Positives = 122/278 (43%), Gaps = 14/278 (5%)

Query: 196 MFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGV 255
           MF+L G     SG+   I++    + G+  G   +I+VL   +  ++SGS++ANT   G 
Sbjct: 69  MFVLMGNLFFHSGIALKIIETLDRSMGRSTGRLSYISVLCGTIFAALSGSNMANTAMMGG 128

Query: 256 ITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPA 315
           + +P M++  +    + G    +     L+PP     A ++ S  QI   D++    +P 
Sbjct: 129 LLLPQMEERKYQRHMSIGPIIGSGGLALLIPP--STLAVLLGSIAQISIADLLLAGVLPG 186

Query: 316 LIYFLSVAFFVRIEAKR--MGVQIVTTSQEPFMKVLLSGWHNLIPLAVLVTLLVVGF--- 370
           L+  L     + ++ +R             PF + +      ++P++ LV   VVG    
Sbjct: 187 LVLALLYVATIWLQLRRNPQAAPAYDVVTAPFWEKIRLICTYILPMS-LVVFCVVGLILL 245

Query: 371 ---TPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINV 427
              TP+ AA   +LSV+V S      +     + ++LE   +       +++       V
Sbjct: 246 GITTPSEAAAFGVLSVLVLSIL--YGRFSWDMVAKSLEGTLRVSVMVFFIIIASKTFSQV 303

Query: 428 ISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGM 465
           ++ +G  +       ++     +TML+++ +  L+LGM
Sbjct: 304 LAFSGATSGMIAWATSYEFAP-ITMLLIMFVVLLILGM 340