Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., TRAP transporter solute receptor, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

 Score =  140 bits (353), Expect = 4e-38
 Identities = 100/319 (31%), Positives = 152/319 (47%), Gaps = 14/319 (4%)

Query: 9   TLLAAITSFGLIGGAYAAEERSYILATASTGGTYYPVGVALATLTKVKLTPSYHFSLSAI 68
           TLLAA  +  +   A AA     IL T  T G YYP+GV L+ +    +  +     S  
Sbjct: 8   TLLAAAAALVVSTTAQAAPVYINIL-TGGTSGVYYPIGVGLSQIYSSGIQDA---KTSVQ 63

Query: 69  SSAGSGENVKLMNDNEAQFAILQGLYGAWAWAG--EGPYAERQNQLRSVSMLWQNVEHFI 126
           ++  S EN+ L+     + A+  G   A A  G  +  +     +LR+++  + N    +
Sbjct: 64  ATKASVENLNLLQAGRGELALALGDSVADAKNGVEDAGFKAPLTKLRAIAGAYPNYIQIV 123

Query: 127 VRSDLAPTGTIADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGVDPDTFNLAYLGYGGSA 186
              +      I  LA +KGK  S+G+  SGTE + R I K  G+      + YL +  S 
Sbjct: 124 ASQESG----IKTLADLKGKTVSVGAAKSGTELNARAIFKAAGLTYQDMKVQYLPFAESV 179

Query: 187 SALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIKQANGNYNLWTKFDIPA 246
             ++N  +D     +G+ + A+    + M      +  TD   K  N  Y       IPA
Sbjct: 180 DLIKNRQLDATLQSSGLGMAAIRDLASTMALSYVAVP-TDVVEKIGNPAYQ---SAMIPA 235

Query: 247 NTYPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAMYENLAFLQGIHKATKDMAIEKAI 306
           NTY G  + + T+A  N L  R D+ +E  YQ+TK ++ENL  L   H A KD+ ++ A 
Sbjct: 236 NTYDGQAEAVPTVAITNILVTREDVPDEVAYQMTKLLFENLTRLGTSHSAAKDITLKNAA 295

Query: 307 EGLPMPLHAGAARYYQEVG 325
           + LP+ LH GA RYY+EVG
Sbjct: 296 KNLPIALHPGAERYYKEVG 314