Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., TRAP transporter solute receptor, TAXI family from Pseudomonas stutzeri RCH2

 Score =  135 bits (340), Expect = 1e-36
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 14/329 (4%)

Query: 1   MKQKRLTQTLLAAITSFGLIGGAYAAEERSYILATASTGGTYYPVGVALATLTKVKLTPS 60
           MK K L     AA+   GL  G   A+E+   + T    G YY  G ++          +
Sbjct: 1   MKGKSLAWIFTAALAGTGL-SGVVQAQEKFVTIGTGGQTGVYYVAGQSICRFVNRN---A 56

Query: 61  YHFSLSAISSAGSGENVKLMNDNEAQFAILQGLYGAWAWAGEGPYAE--RQNQLRSVSML 118
            +   +A +S G   NV  +   E  F I+Q  +   A  G  P+ +  + + +R+V  L
Sbjct: 57  ENIKCNAPASGGGVANVNGLRSGEFNFGIMQSDHQYKAMEGVAPFEKEGKMDDIRAVFSL 116

Query: 119 WQNVEHFIVRSDLAPTGTIADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGVDPDTFNLA 178
              V   + R     +  I  L  +KGK+ +IG+  SG   +  +IMK  G D   F+LA
Sbjct: 117 QSEVFTVLARR----SANIKGLDDLKGKRVNIGNPGSGQRDTLEEIMKVKGWDQSVFSLA 172

Query: 179 Y-LGYGGSASALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIKQANGNYN 237
             L     ASAL +  ID M    G P GA+ +A      D  ++  T  +I +     +
Sbjct: 173 AELKPAEQASALGDNNIDAMTYFVGHPNGAIQEATTT--TDAVLVPITGPEIDKLLEEKS 230

Query: 238 LWTKFDIPANTYPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAMYENLAFLQGIHKAT 297
            +TK +IP   Y G D+   +I     L+  + +  E VYQL K+++EN+   Q +H A 
Sbjct: 231 YYTKAEIPGGLYKGNDQATQSIGGKAVLSTTSKVDAEVVYQLVKSVFENIERFQRLHPAF 290

Query: 298 KDMAIEKAIE-GLPMPLHAGAARYYQEVG 325
           KD+  E+ IE GL  PLH GA RYY+E G
Sbjct: 291 KDLKPEEMIEVGLSAPLHEGAERYYKERG 319