Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., TRAP transporter solute receptor, TAXI family from Phaeobacter inhibens DSM 17395

 Score =  110 bits (274), Expect = 6e-29
 Identities = 87/323 (26%), Positives = 146/323 (45%), Gaps = 12/323 (3%)

Query: 7   TQTLLAAITSFGLIGGAYAAEERSYILATASTGGTYYPVGVALATLTKVKLTPSYHFSLS 66
           T+  ++A+ +   +  A  AEE    + T    G YYP G A+  L   K    +    S
Sbjct: 4   TKLAVSALVATAFMAPAAMAEE-FITIGTGGVTGVYYPTGGAICRLVN-KTRKEHGIRCS 61

Query: 67  AISSAGSGENVKLMNDNEAQFAILQGLYGAWAWAGEGPYAERQ--NQLRSVSMLWQNVEH 124
             S+ GS  N+  + + E +F + Q  +   A+ G   + E+     LR+V  +      
Sbjct: 62  VESTGGSVYNINTIREGELEFGVAQSDWQYHAYNGTSKFEEQGAFEGLRAVFSVHPEPFT 121

Query: 125 FIVRSDLAPTGTIADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGVDPDTFNLAY-LGYG 183
            + R+D   T        +KGK+ +IG+  SG   +   +++  G   D F LA  L   
Sbjct: 122 VVARADAGVTS----FDDLKGKRVNIGNPGSGQRGTMEVLLEAKGWGMDAFALATELKAA 177

Query: 184 GSASALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIKQANGNYNLWTKFD 243
             ++AL +  ID M    G P G++ +A  A   D  +++   E +++   + + +    
Sbjct: 178 EQSAALCDNQIDAMVYTVGHPSGSIQEATTAC--DSVLVTVDGEAVEKLIADNSFYRTAT 235

Query: 244 IPANTYPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAMYENLAFLQGIHKATKDMAIE 303
           IP   Y G D  + T            +S+E VY + KA++EN    + +H A  ++  E
Sbjct: 236 IPGGMYRGSDADVGTFGVGATFVTSDQVSDEAVYTVVKAVFENFDDFKKLHPAFANLKPE 295

Query: 304 K-AIEGLPMPLHAGAARYYQEVG 325
           + A  GL  PLH GAA+YY+E G
Sbjct: 296 EMATAGLSAPLHPGAAKYYKEQG 318