Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., TRAP transporter solute receptor, TAXI family protein from Marinobacter adhaerens HP15

 Score =  109 bits (272), Expect = 1e-28
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 14/322 (4%)

Query: 11  LAAITSFGLIGGAYAAEERSYI-LATASTGGTYYPVGVALATLTKVKLTPSYHFSLSAIS 69
           +AA  S G    + +A+E+ ++ + T    G YYP G A+  L  +     +    S  S
Sbjct: 12  VAAAVSLGAASTSVSAQEQRFVTIGTGGVTGVYYPAGGAICRLVNMD-RKEHGIRCSVES 70

Query: 70  SAGSGENVKLMNDNEAQFAILQGLYGAWAWAGEGPYAE--RQNQLRSVSMLWQNVEHFIV 127
           + GS  N+  +   E   A+ Q  +   A+ G   + +      LR+V  L  + E F V
Sbjct: 71  TGGSVYNLNAIRQGELDLAVAQSDWQYHAYNGTSQFKDDGANKDLRAVFSL--HPEPFTV 128

Query: 128 RSDLAPTGT-IADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGVDPDTFNLAY-LGYGGS 185
              +A  G+ I     ++GK+ S+G+  SG   +   +M  +G   D F+LA  +     
Sbjct: 129 ---VASKGSGIKTFEDLEGKRVSVGNPGSGQRATAEVLMDEMGWTLDKFSLAAEIKAAEQ 185

Query: 186 ASALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIKQANGNYNLWTKFDIP 245
           + AL +G ID      G P GA+ +A  +   D  +++  +   ++       + K  IP
Sbjct: 186 SQALCDGNIDAFFYTVGHPSGAIKEATTSC--DSVLVNVDNAATQKLIDENPYYRKAVIP 243

Query: 246 ANTYPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAMYENLAFLQGIHKATKDMAIEKA 305
              Y G D  +TT          TD+ ++ VY + KA++EN    + +H A  ++  E+ 
Sbjct: 244 GGMYRGSDDDVTTFGVAATFVSSTDVPDDVVYAVVKAVFENFDSFKRLHPAFANLNKEEM 303

Query: 306 I-EGLPMPLHAGAARYYQEVGI 326
           + + L  PLH GAA+YY+E G+
Sbjct: 304 VSDALSAPLHPGAAKYYKEAGL 325