Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., immunogenic-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  135 bits (340), Expect = 1e-36
 Identities = 91/318 (28%), Positives = 154/318 (48%), Gaps = 14/318 (4%)

Query: 11  LAAITSFGLIGGAYAAEERSYILATASTGGTYYPVGVALATLTKVKLTPSYHFSLSAISS 70
           ++A  +  L     AA      + T  T G YYP+GVAL+ L    +  +     S  ++
Sbjct: 10  VSAALTLSLSAATMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGA---KTSVQAT 66

Query: 71  AGSGENVKLMNDNEAQFAILQGLYGAWAWAGEGP--YAERQNQLRSVSMLWQNVEHFIVR 128
             S EN+ L+     + A+  G   A A+ G+    + +  +++R ++  + N    +  
Sbjct: 67  KASVENLNLLQAGRGELALALGDSVAAAYQGDADAGFKKPLDKVRVLAAAYPNYIQIVAS 126

Query: 129 SDLAPTGTIADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGVD-PDTFNLAYLGYGGSAS 187
            +      I  LA +KGK+ S+G+  SGTE + R I K  G+   D   + +L Y  S  
Sbjct: 127 KESG----IKTLADLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKVEFLPYAESVE 182

Query: 188 ALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIKQANGNYNLWTKFDIPAN 247
            ++N  +D     +G+ + A+      M   I  +   ++ I + N     +    IPA+
Sbjct: 183 LIKNRQLDATLQSSGLGMAAIRDLATTM--PINFVEVPEDVILKINNP--AYQHGVIPAS 238

Query: 248 TYPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAMYENLAFLQGIHKATKDMAIEKAIE 307
           TY G    ++T+A  N    +T +S++  YQ+TK M+E+L  L   H A K + ++KA +
Sbjct: 239 TYEGQTADVSTVAIQNLFVTQTGVSDDLAYQMTKLMFEHLDRLGNAHSAAKAIQLDKATK 298

Query: 308 GLPMPLHAGAARYYQEVG 325
            LP PLH GA RY++EVG
Sbjct: 299 NLPAPLHPGAERYFKEVG 316