Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., TRAP transporter solute receptor, TAXI family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 25/217 (11%)

Query: 124 HFIVRSDLAPTGTIADLASMKGKKFSIGSKN-SGTEFSGRQIMKGVGVDPDTFNLAYLGY 182
           H+I R+       I  LA ++ +    G    + TE   R I +  G+ P    L   G+
Sbjct: 119 HYITRAGSG----IESLADLRSRTVFAGPPGGAATEVVLRVIEQSTGITPGEMKLQAFGF 174

Query: 183 GGSASALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILS--FTDEQIKQANGNYNLWT 240
             +  A Q+G ID +  P  +P  AV Q   A+ + I++L     +  I+   G     T
Sbjct: 175 DAAIQAFQDGKIDVIVLPTNLPSAAVQQF--ALTSRIRLLDVDLRNVTIRAETGG----T 228

Query: 241 KFDIPANTYPGVDKTITTIAQPNFLAVRTD----ISEEDVYQLTKAMYENLAFLQGIHKA 296
             +IP + Y G ++   T  + +   V       + E  VY++T+A++ENL     IH A
Sbjct: 229 ANEIPPDAY-GPNQVNDTATRTHGSIVNFSAGMHVPEHVVYEVTRAIWENLG---DIHSA 284

Query: 297 TKDM----AIEKAIEGLPMPLHAGAARYYQEVGIKIP 329
              M      E A+  +   LH GA RYY+E G  IP
Sbjct: 285 ADWMPGTITPEMALSLVSGRLHPGAERYYREAGWPIP 321