Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Nitrogen regulation protein NR(I) from Pseudomonas fluorescens FW300-N2E2

 Score =  391 bits (1005), Expect = e-113
 Identities = 220/448 (49%), Positives = 292/448 (65%), Gaps = 20/448 (4%)

Query: 6   IALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSL 65
           + +++D+  +R A  QWL L+GF V +FA     LA + +     ++SDVR+P   GL L
Sbjct: 5   VMVVDDEGSIRSAVEQWLSLSGFQVQLFARADECLARLPEHFPGVILSDVRMPGLSGLEL 64

Query: 66  LVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNA 125
           L  ++     +PVIL+TGHGDV MAV+A+  GA+DF+EKPF PE L  ++ +A+ +    
Sbjct: 65  LAEVRRRDPDLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPEALLGSLRRALDKRTLV 124

Query: 126 LSSQSRAHYLASAKG-LEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQ 184
           L ++ R H  A A+  L+  L+G  +++Q LR Q+  +AA+  NV+I GETG GKELVA+
Sbjct: 125 LENR-RLHEQADARARLDGTLLGVSRALQNLRRQVLDLAALPVNVLIRGETGSGKELVAR 183

Query: 185 CLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLD 244
           CLH    R    FVA+NC AIPE LFE+ELFGHE+GAFTGA  +RIGKLE A+ GTLFLD
Sbjct: 184 CLHDFGTRASMPFVALNCAAIPEALFEAELFGHESGAFTGAQGKRIGKLEYANGGTLFLD 243

Query: 245 EIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQHA---EFRQDLFY 301
           EIESMPLA QVK+LRVLQ+  +ER+GSNQ I +DLR+IAA K +L   A    FR+DL Y
Sbjct: 244 EIESMPLAQQVKLLRVLQEQKLERLGSNQSIQVDLRIIAATKPDLLDEARAGRFREDLAY 303

Query: 302 RLNVAQLYLPPLRERGDDILLLFEHF----CVQVKPTWRSLSEADRLALLTYRWPGNVRE 357
           RLN+A+L LPPLRER +DI LLFEHF      ++      LS      LL++ WPGNVRE
Sbjct: 304 RLNIAELRLPPLRERREDIPLLFEHFTHSAAERLGRAAAPLSGPQLSHLLSHDWPGNVRE 363

Query: 358 LRNVALRYALDDSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRHQGNI 417
           L NVA R  L   +   + L + PG +         LA Q   FE + +  AL RH+G++
Sbjct: 364 LANVAERQVL--GLDQPQALETEPGQS---------LAAQQEAFEAQCLRAALTRHKGDV 412

Query: 418 SEVMKELDLPRRTLNQKMQKFGLLRGDF 445
             V++EL LPRRT N+KMQ+ GL R  F
Sbjct: 413 KAVLEELQLPRRTFNEKMQRHGLSREMF 440