Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., two-component response regulator protein from Sinorhizobium meliloti 1021

 Score =  336 bits (862), Expect = 8e-97
 Identities = 190/447 (42%), Positives = 265/447 (59%), Gaps = 16/447 (3%)

Query: 1   MESQRIALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDT 60
           M   RI L++D++ +R+++ Q L+LAGF V  FA    AL  I       V+SD+R+P  
Sbjct: 1   MSESRILLVDDEEELRRSSAQALELAGFRVDTFASAEYALERIAFSFHGVVISDIRMPGM 60

Query: 61  DGLSLLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVS 120
           DG++ L  ++ + + +PVIL+TGHGDV +AV+A+ +GA+DF+EKPF  + LA ++ +A+ 
Sbjct: 61  DGMTFLQRIREIDAELPVILVTGHGDVQLAVRAMREGAYDFVEKPFTAQMLAGSIRRALD 120

Query: 121 QYQNALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKE 180
                L ++           +EQ L G+ +++  LR +I  + A D + +I GETG GKE
Sbjct: 121 WRSLVLENRRLRAVAGKRDDIEQRLPGRSQAMVDLRYRIRAIGASDADTLIIGETGVGKE 180

Query: 181 LVAQCLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGT 240
           +VA+ LH  S R  G F+AINC A+PENL ESELFGHE GAF GA++ R GK E    GT
Sbjct: 181 VVARALHDLSSRASGPFIAINCAALPENLIESELFGHEPGAFPGALRPRYGKFEHGRGGT 240

Query: 241 LFLDEIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQH---AEFRQ 297
           + LDEI SMP  +Q K LRVLQ+ V+ R+GSN+ + +D+R IA +K +L +    + FR 
Sbjct: 241 ILLDEIGSMPFDLQAKFLRVLQERVITRLGSNETVPLDVRFIATSKVDLEREVASSRFRA 300

Query: 298 DLFYRLNVAQLYLPPLRERGDDILLLFEHFCVQVKPTWRS----LSEADRLALLTYRWPG 353
           DL YRLNVA L +P L +R  DI LLF     +    +      +S A    +    WPG
Sbjct: 301 DLLYRLNVATLRVPTLSQRRSDIPLLFMQLVRESAARYGRDDIVVSPALASEMAAREWPG 360

Query: 354 NVRELRNVALRYALDDSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRH 413
           NVRELRN A R  L   +   E LA   G           L  +V  FE+ VIA AL  H
Sbjct: 361 NVRELRNAAERLVLGLEVEREEALAPANGQR---------LTDKVAAFEKSVIASALAAH 411

Query: 414 QGNISEVMKELDLPRRTLNQKMQKFGL 440
            G +  V + L + R+TL +KMQKFGL
Sbjct: 412 GGALKPVYESLGISRKTLYEKMQKFGL 438