Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., sigma-54-dependent Fis family transcriptional regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  259 bits (662), Expect = 1e-73
 Identities = 160/451 (35%), Positives = 253/451 (56%), Gaps = 26/451 (5%)

Query: 5   RIALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLS 64
           RI ++EDD    Q    +L   G ++ +      +   +E   F  ++ D RLPD  GL 
Sbjct: 3   RILILEDDTTFAQLLEGFLTKNGHEITLVTQVKQSFKQVENNEFDLLLIDYRLPDGTGLE 62

Query: 65  LLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQN 124
           +L  ++++   +P I++T   DV  AV+++  GAFD+I KP  P+ L   +       +N
Sbjct: 63  VLSHIRDLGLSIPAIVMTSFNDVRTAVRSIQLGAFDYITKPVNPDELLMVI-------KN 115

Query: 125 ALSSQSRAHYLASAKGLE---QILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKEL 181
           +L+ +     L S +  E     + G+      L E I  VA  D +VII GE+G GKE 
Sbjct: 116 SLTKKD----LKSVEPKETNSDFIKGKSAIADKLYEHINLVAPTDMSVIIQGESGTGKEF 171

Query: 182 VAQCLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTL 241
            A+ LHQ S+R    FVAI+CGA+ ++L  SELFGH  GAFTGA+  + G+ E A+ GTL
Sbjct: 172 AARTLHQQSKRADKPFVAIDCGALSKDLAASELFGHVKGAFTGALNDKKGQFEAANGGTL 231

Query: 242 FLDEIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEEL---RQHAEFRQD 298
           FLDE+ ++   +Q+K+LR LQ+ V++ +GS + I +++R+I A  ++L    Q  EFR+D
Sbjct: 232 FLDEVGNLSYEVQIKLLRALQERVIQPLGSTKQIPVNVRIITATNDDLANSMQQGEFRED 291

Query: 299 LFYRLNVAQLYLPPLRERGDDILLLFEHFCV----QVKPTWRSLSEADRLALLTYRWPGN 354
           L++RLN  ++ LPPLR+RG D+ L   HF       ++   +S+S   +  LL+Y WPGN
Sbjct: 292 LYHRLNEFKIQLPPLRDRGGDLELFINHFIQLSNRDLERNVKSVSSEAKALLLSYDWPGN 351

Query: 355 VRELRNVALRYALDDSISVGEILASCPGM---TEEEASAGLPLAIQVHN--FERKVIAQA 409
           +REL NV  R  L     V +I A    M      +++ G    ++  N   E+ +I + 
Sbjct: 352 LRELSNVIKRMVLLSPGDVAQINALPDEMMISVHHQSAPGNSSDLKAVNEQNEKALITET 411

Query: 410 LHRHQGNISEVMKELDLPRRTLNQKMQKFGL 440
           L + + N S+  K L++ R+TL  KM+++G+
Sbjct: 412 LIKVRHNKSKAAKILNIDRKTLYAKMERYGI 442