Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  381 bits (979), Expect = e-110
 Identities = 215/446 (48%), Positives = 287/446 (64%), Gaps = 14/446 (3%)

Query: 2   ESQRIALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTD 61
           +S ++ L+EDD  VR    Q LQL    V+       A   + +     VVSD+RLP  D
Sbjct: 5   DSLQVLLVEDDPDVRLGCEQALQLEDIPVSSVDSAEKARRRLTRDFPGIVVSDIRLPGMD 64

Query: 62  GLSLLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQ 121
           G++LL  L+ +   +PV+LITGHGDV +AV+A+  GA DFIEKPF P+ L   V +A+ +
Sbjct: 65  GMALLKELQAIDPELPVVLITGHGDVSLAVQAMKGGAHDFIEKPFSPDYLVEVVRRALDK 124

Query: 122 YQNALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKEL 181
            +  L  +     L S   LE  LIG+  ++  +R+ +A +     +++I+GETG GKEL
Sbjct: 125 RRLTLEVRQLRARLESRDTLEARLIGRSPAMVKVRQLVADLGNSAADILIFGETGTGKEL 184

Query: 182 VAQCLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTL 241
            A+CLH+A  R+ G FVAINCG +PE LFESE+FGHEAGA+TGA K+RIGK+E A  GTL
Sbjct: 185 AARCLHEAGPRRNGNFVAINCGGLPETLFESEIFGHEAGAYTGAAKKRIGKIEHASGGTL 244

Query: 242 FLDEIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAK---EELRQHAEFRQD 298
           FLDEIESMP+AMQ+K+LRVLQ+  +ER+GSN PI +D RVIAA K   +EL     FR D
Sbjct: 245 FLDEIESMPMAMQIKLLRVLQERSLERLGSNTPIPVDCRVIAATKADLKELSDQGRFRAD 304

Query: 299 LFYRLNVAQLYLPPLRERGDDILLLFEHFCVQVKPTW-RSLSEADRL---ALLTYRWPGN 354
           L+YRLNVA L LPPLRER +DI LLFEHF +Q      R +  AD      LL Y WPGN
Sbjct: 305 LYYRLNVATLPLPPLRERREDIPLLFEHFLLQAAARHERPVPAADPARMGPLLAYDWPGN 364

Query: 355 VRELRNVALRYALDDSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRHQ 414
           VRELRNVA R  L     V    A  P  T++ +     LA  V +FER +I +AL R+Q
Sbjct: 365 VRELRNVADRCVLGIEAGVAPFTAESP--TQKRS-----LAETVDSFERALITEALERNQ 417

Query: 415 GNISEVMKELDLPRRTLNQKMQKFGL 440
           G+++   ++L + + TL+ K++K+GL
Sbjct: 418 GSLARTAEDLRIAKTTLHDKIRKYGL 443