Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., two-component system response regulator GlrR from Klebsiella michiganensis M5al

 Score =  282 bits (721), Expect = 2e-80
 Identities = 174/450 (38%), Positives = 244/450 (54%), Gaps = 23/450 (5%)

Query: 5   RIALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLS 64
           R+ L++DD  + +  G  L   G+ V     G  AL  + +     VVSD+R+ + DGL 
Sbjct: 8   RLLLVDDDPGLLKLLGMRLVSEGYSVLTAESGPEALRMLGRDKVDLVVSDLRMDEMDGLQ 67

Query: 65  LLVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQN 124
           L   ++ VQ  MPVI++T HG +  AV A  QG F F+ KP   + L   +  A+ Q   
Sbjct: 68  LFSEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYKAIDDALEQSAP 127

Query: 125 ALSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQ 184
               + R           Q ++ +   ++ L EQ   VA  D +V+I G++G GKE++AQ
Sbjct: 128 TTDERWR-----------QAIVTRSPLMERLLEQAGMVAQSDVSVLINGQSGTGKEIIAQ 176

Query: 185 CLHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLD 244
            +H AS R+   FVAINCGA+PE L ESELFGH  GAFTGAV  R G  + A+ GTLFLD
Sbjct: 177 AIHNASPRRDKPFVAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLD 236

Query: 245 EIESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQ---HAEFRQDLFY 301
           EI  MP+A+QVK+LRVLQ+  V  +GSN+ I ID+R+I+A   +L +     EFR+DLFY
Sbjct: 237 EIGDMPVALQVKLLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDLFY 296

Query: 302 RLNVAQLYLPPLRERGDDILLLFEHFCVQV----KPTWRSLSEADRLALLTYRWPGNVRE 357
           RLNV  L +PPL ER +DI LL  H   Q     KP  R+ S      L+  +WPGNVR+
Sbjct: 297 RLNVVNLKIPPLAERTEDIPLLANHLLRQSADRHKPFVRAFSTDAMKRLMAAKWPGNVRQ 356

Query: 358 LRNVALR-YALDDSISVGEILASCPGMTEEEASAGLPLAIQVHN-FERKVIAQALHRHQG 415
           L NV  +  AL  S  + + L        E  +  LP  ++  N FE   + + L   +G
Sbjct: 357 LVNVIEQCVALTSSPVISDALVE---QALEGENTALPTFVEARNQFELNYLRKLLQITKG 413

Query: 416 NISEVMKELDLPRRTLNQKMQKFGLLRGDF 445
           N++   +     R    + + +  L   DF
Sbjct: 414 NVTHAARMAGRNRTEFYKLLSRHELDANDF 443