Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., transcriptional regulatory protein ZraR from Klebsiella michiganensis M5al

 Score =  268 bits (685), Expect = 3e-76
 Identities = 166/441 (37%), Positives = 248/441 (56%), Gaps = 17/441 (3%)

Query: 8   LIEDDDIVRQATGQWLQLA-GFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSLL 66
           L+ DDDI      Q L    G+ VA+  +G  AL  + ++ F  V+ D+R+ + DG+  L
Sbjct: 9   LVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREKVFDLVLCDIRMAEMDGIETL 68

Query: 67  VALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNAL 126
             +K     +PV+++T +  VD AV+AL  GA D++ KP   ++L  T+++A++  +  L
Sbjct: 69  KEIKTFNPSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQLTLSEALAHTR--L 126

Query: 127 SSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQCL 186
           S        A+  G+    +G   +++ L   I  VA  D  V+I+GE+G GKELVA+ L
Sbjct: 127 SESPVTETPAAQFGM----VGDSPAMRALLNNITLVAPSDATVLIHGESGTGKELVARAL 182

Query: 187 HQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLDEI 246
           H +S R R   V +NC A+ E+L ESELFGHE GAFTGA KRR G+   AD GTLFLDEI
Sbjct: 183 HASSARSRRPLVILNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEI 242

Query: 247 ESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQH---AEFRQDLFYRL 303
             +   MQV++LR +Q+  V+RVGSNQ +++D+R+IAA   +L +      FRQDL+YRL
Sbjct: 243 GDISPLMQVRLLRAIQEREVQRVGSNQTLSVDVRLIAATHRDLAEEVSAGRFRQDLYYRL 302

Query: 304 NVAQLYLPPLRERGDDILLLFEHFCVQV----KPTWRSLSEADRLALLTYRWPGNVRELR 359
           NV  + +PPLR R +DI  L  +F  +     +   +  +      L+ Y WPGN+REL 
Sbjct: 303 NVVTIDMPPLRHRREDIPPLARYFLQRYAERNRKAVQGFTPQAMDLLIHYAWPGNIRELE 362

Query: 360 NVALRYAL---DDSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRHQGN 416
           N   R  +    + IS  E+  +  G    +A  G      +   E++ I  AL R  GN
Sbjct: 363 NAVERAVVLLTGEYISERELPLAITGTPVADAPHGDDSIQPLVEVEKEAILAALERTGGN 422

Query: 417 ISEVMKELDLPRRTLNQKMQK 437
            +E  + L + R+TL  K+ +
Sbjct: 423 KTEAARRLGITRKTLLAKLSR 443