Pairwise Alignments

Query, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., sigma-54 dependent transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score =  362 bits (929), Expect = e-104
 Identities = 208/447 (46%), Positives = 285/447 (63%), Gaps = 31/447 (6%)

Query: 6   IALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSL 65
           + LIEDDD+VR    Q L LA   V  FAD  SALAA+  Q+ A VV+DVRLP  DGL++
Sbjct: 17  VFLIEDDDVVRLGCEQALSLADVPVQSFADAESALAALATQTPAVVVTDVRLPGRDGLAV 76

Query: 66  LVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNA 125
           L  +      +PVILITGHGDV MAV A+  GA+DF+EKPF  ERL + V +A+ + +  
Sbjct: 77  LREMLQHDRQLPVILITGHGDVTMAVAAMRAGAYDFMEKPFHSERLVDVVRRALEKRR-- 134

Query: 126 LSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQC 185
           L+S++     A        LIGQ   +Q +R  +  +A  D ++++ GETG GKE++A+ 
Sbjct: 135 LTSENLRLREALQGRQAYPLIGQSAVMQNVRRLVTALAPTDADILVTGETGSGKEVLARA 194

Query: 186 LHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLDE 245
           +H+ S R+RG FVA+NC A+PE++FESE+FGHEAGAFTGA +RRIGK+E AD GTLFLDE
Sbjct: 195 IHEGS-RRRGPFVALNCAALPESVFESEMFGHEAGAFTGANRRRIGKMEYADGGTLFLDE 253

Query: 246 IESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELRQ---HAEFRQDLFYR 302
           IESMPLA+Q K+LR LQ+  +ER+GSN  + ++ RV+AAAK +L++   H +FR DL+YR
Sbjct: 254 IESMPLALQAKLLRALQERSIERLGSNASVPVNCRVVAAAKVDLKEASDHGQFRADLYYR 313

Query: 303 LNVAQLYLPPLRERGDDILLLFEHFCVQV-------KPTWRSLSEADRLALLTYRWPGNV 355
           LNV  + LP LR+R +DI LL  HF  Q         P W   S  D +    + WPGNV
Sbjct: 314 LNVVSIALPALRQRAEDIPLLMAHFLQQAAVRYERPAPDW---SAQDMMRWQHHDWPGNV 370

Query: 356 RELRNVALRY--ALDDSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRH 413
           REL+NVA R+   LDD +   E        + + + AG  +A+     ER  I +AL   
Sbjct: 371 RELKNVAERFCLGLDDGLVASE--------SSQHSLAGRMMAV-----ERATIEEALRAT 417

Query: 414 QGNISEVMKELDLPRRTLNQKMQKFGL 440
           +GN++     L +PR+TL  K+ + G+
Sbjct: 418 EGNVARAADLLAVPRKTLYDKLNRHGI 444