Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., C4-dicarboxylate transport sensor protein from Pseudomonas fluorescens FW300-N2E2

 Score =  158 bits (399), Expect = 8e-43
 Identities = 95/252 (37%), Positives = 149/252 (59%), Gaps = 2/252 (0%)

Query: 420 LIDISKRKKAEIALQNANRDLQQRVEERTAALKSAQQELIEASKMAALGRMSSAITHELN 479
           L+ +++R +     Q +  +L++ VEERT  L++AQ  L++++K+AALG+MS+A+ HE+N
Sbjct: 317 LLFLNQRWRLARLRQRSREELERLVEERTRDLRTAQDGLVQSAKLAALGQMSAALAHEIN 376

Query: 480 QPLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDAL-QA 538
           QPLT  R  L++  LLL+ G         K V  ++ RMAA+T  LK+FA   P  L + 
Sbjct: 377 QPLTAQRMQLATLRLLLDHGRVDDAYKALKPVDDMLTRMAALTGHLKTFARKSPSGLRER 436

Query: 539 ISLPDALQEILRIHQARLTPVDVRVRLSSDLPL-VMGEEQRLRQVLGNLVSNALDAMSQT 597
           + L   + + L++   RL    +   L    P  V G+  RL QVL NL+ NALDAM++ 
Sbjct: 437 LDLAAVVDQALQLLDTRLRDEQISTVLHLTRPAWVRGDAIRLEQVLINLLRNALDAMAEQ 496

Query: 598 LEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSL 657
              +L +   ++E    + VSD+G GIA E L  +F+PF T+K +G+GLGLGLA+    +
Sbjct: 497 PIKRLEVRLEADEQLWRLTVSDSGTGIAEEHLAQVFDPFFTTKAVGDGLGLGLAVSFAII 556

Query: 658 RDMQGSIVATNN 669
            +  G + A N+
Sbjct: 557 HESGGRLTADNH 568



 Score = 36.6 bits (83), Expect = 3e-06
 Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 54/330 (16%)

Query: 27  SENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMTNEANTLKLFQGDDRPQAQ--L 84
           +E   L +      Q+L  Y + +   + R+  LP ++  +       +G      Q  L
Sbjct: 32  AERVALEEDASRANQQLALYANSLHTLIERYRALPAVLALDPELRSALKGPVGAAQQDVL 91

Query: 85  QQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSDGKAIIHK------ILQQREGI 138
            ++L +++ AA +    +L  +G  + AS    NW+L     + H        LQ R   
Sbjct: 92  NRKLERINGAAQSSTLELLDHTGLAVAAS----NWRLPSSY-VGHNYGFRPYFLQTRTQG 146

Query: 139 SIVTKSVGST---PTYFVAAPVYLDV-EIVGAVAVQVDLNVLADQWFASDELILFQNSQR 194
           +    +VG T   P YF+++ V  D  E +GA+ V+++   L  +W    + +L  +++ 
Sbjct: 147 TGRFYAVGVTSGIPGYFLSSAVTDDNGEFLGAMVVKLEFPELEREWRQGSDTLLVSDARS 206

Query: 195 HYFLSS------------SSVYSADWIATHP------EVVAAAQKRSLFDGTRLTLWQVE 236
             F+++            S    A+  AT        + +A    R   D + L   +  
Sbjct: 207 IIFIANRPGWRYRHLQPLSDSDRAELKATRQYDKQPLQPLAYETLRRFDDNSHLARVETP 266

Query: 237 Q--APYLAQSVTLDDLNWTLTYLTPLK---------NLNATVNWISTSAMVGVLLLLLLM 285
              A YL +S+ L    WTL  L   +          L A  +W++    +  LLL L  
Sbjct: 267 DGAAEYLWESLPLTAEGWTLHLLRRPQIAFEDRRNAGLAAAGSWLA----LVFLLLFLNQ 322

Query: 286 RLRYEQYQKRLSEAKIQHVLFEAEERQRNM 315
           R R  + ++R S  +++ ++   EER R++
Sbjct: 323 RWRLARLRQR-SREELERLV---EERTRDL 348