Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., Signal transduction histidine kinase regulating C4-dicarboxylate transport system from Pseudomonas fluorescens FW300-N2E2

 Score =  167 bits (423), Expect = 1e-45
 Identities = 114/303 (37%), Positives = 171/303 (56%), Gaps = 18/303 (5%)

Query: 396 GSLFPVLFSLIAVSWKDRRHYLVTLIDISKRKK---AEIA-----LQNANRDLQQRVEER 447
           G+   VL  L+ +  + RRHYL  +   +K ++     +A     L+  NR L+Q V ER
Sbjct: 287 GAALLVLMLLLGLMMQRRRHYLDRIAFEAKARQELEGRVAERTSDLEGLNRRLKQEVLER 346

Query: 448 TAA---LKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLERGETQLL 504
             A   L  AQ +L++A K++ALG MS++I+HELNQPL  +R+   + E+LL+   T+  
Sbjct: 347 EQAQQELVRAQDDLVQAGKLSALGTMSASISHELNQPLAAIRSYAENAEILLDHQRTEDA 406

Query: 505 KANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILRIHQARLTPVDVRVR 564
           + N KL+  L  RMA++ + L++FA     A ++++L  AL + L +   R   ++  V 
Sbjct: 407 RGNLKLISELTGRMASIIAHLRAFARRDRHAPESVALQPALDDALALLAKRRRSME--VE 464

Query: 565 LSSDLPL----VMGEEQRLRQVLGNLVSNALDAMSQTLEP-KLSISAVSEEDQVIVRVSD 619
           L  DLP     V   E RLRQVLGNL++NALDA+++   P KL +SA + E  V + + D
Sbjct: 465 LIRDLPAATLWVEAGETRLRQVLGNLLANALDALTEKGPPRKLWLSAQATETGVNLYIRD 524

Query: 620 NGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEIR 679
           NG G   E L    EPF T+K   +GLGLGLAI    +R   G +   N+ + G    ++
Sbjct: 525 NGPGFCMEALGRAGEPFYTTKTRTQGLGLGLAICDTLMRAFGGELSFANHKEGGALITLK 584

Query: 680 LRA 682
           LRA
Sbjct: 585 LRA 587



 Score = 62.0 bits (149), Expect = 8e-14
 Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 36/323 (11%)

Query: 9   IVLVILLLIAVRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMTN-E 67
           + L+ L L  + W    ++E +   +      Q L  Y++++  TL R+  LP ++ +  
Sbjct: 14  LALLALCLAPLLWPLEHLAERYYRSELAGQNRQTLDLYVANLLGTLHRYEVLPQILGDLP 73

Query: 68  ANTLKLFQGDDR-PQAQLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSDG-- 124
           A    L   DD   Q    + L  +      +  Y++  SG  L AS    NW   D   
Sbjct: 74  ALRAALSAPDDGVTQGNANRLLKNISAQTGAEVMYLMDPSGKTLAAS----NWDKHDSFV 129

Query: 125 ------KAIIHKILQQREGISIVTKSVGSTPTYFVAAPVYLDVEIVGAVAVQVDLNVLAD 178
                 +    + +  R G      +  +   YF AA V+   +++G + V+VDL+    
Sbjct: 130 GRNFAFRPYFIEAMAGRLGRFFGLGTTSAKRGYFFAAAVHDREKVIGVLVVKVDLDHTES 189

Query: 179 QWFASDELILFQNSQRHYFLSSSSVYSADWIATHP------EVVAAAQKRSLFDGTRLTL 232
            W  + E +L  +      L+S   +   + AT P      E ++A Q     +   L L
Sbjct: 190 LWGKTPEQLLVTDHNGVVILTSRQEWR--FRATRPLNDAEREAISAVQPYPTREPKPLNL 247

Query: 233 WQVEQAPYLAQSVTLDDLNWTLTYLTPLKNLN---ATVNWISTSAMVGVLLLLLLMRLRY 289
                  +L Q+ ++++  W+++ L P   ++    TV  I  +A++ ++LLL LM  R 
Sbjct: 248 ---NDNAWLTQTQSIEETGWSVSILAPRTLIDRPVRTVVAIGGAALLVLMLLLGLMMQRR 304

Query: 290 EQYQKRLSEAKIQHVLFEAEERQ 312
             Y  R++        FEA+ RQ
Sbjct: 305 RHYLDRIA--------FEAKARQ 319