Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 845 a.a., Histidine kinase/response regulator hybrid protein from Pseudomonas fluorescens FW300-N2E2

 Score =  111 bits (278), Expect = 1e-28
 Identities = 88/297 (29%), Positives = 147/297 (49%), Gaps = 36/297 (12%)

Query: 416 YLVTLIDISKRKKAEIALQNANRDLQQRVEERTAALKSA----QQELIE----------A 461
           + + +ID ++ +K E AL+N N  L++RV  RT  L  A    Q E+ E          A
Sbjct: 407 FYIFVIDETESRKTEEALRNLNETLEERVIARTQQLAEANHRLQSEMFERERAEEALRHA 466

Query: 462 SKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAM 521
            KM A+G+++  I H+ N  LTG+   L   +  +  G    +   T+   S  +R AA+
Sbjct: 467 QKMEAVGQLTGGIAHDFNNMLTGILGSLDLMQRYIAAGRAAEIGRFTEAAVSSANRAAAL 526

Query: 522 TSQLKSFAFNRP---DALQAISLPDALQEILRIHQARLTP--VDVRVRLSSDLPLVMGEE 576
           T +L +F+  +      L A  L  +L+++L    +R T   + +R++L+S+L  V  + 
Sbjct: 527 THRLLAFSRRQSLDRKPLDANDLVHSLEDLL----SRTTGDHIVLRLQLASELWPVNTDA 582

Query: 577 QRLRQVLGNLVSNALDAMSQTLEPKL-------------SISAVSEEDQVIVRVSDNGCG 623
            +L   L NLV NA DAM +  E  +             ++  V   D V++ VSDNG G
Sbjct: 583 SQLENALLNLVINARDAMPEGGELVIETANVYLDGTDINTLEPVKAGDYVMIAVSDNGSG 642

Query: 624 IAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEIRL 680
           + P +L   F+PF T+K +G+G GLGL+++    +   G +   + P  G   ++ L
Sbjct: 643 MTPAVLAKAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGHLNLDSVPGQGTRVQLYL 699