Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 687 a.a., sensory box histidine kinase/response regulator from Pseudomonas fluorescens FW300-N1B4

 Score =  103 bits (256), Expect = 4e-26
 Identities = 79/261 (30%), Positives = 134/261 (51%), Gaps = 21/261 (8%)

Query: 420 LIDISKRKKAEIALQNANRDLQQRVEERTAALKSAQQELIEASKMAALGRMSSAITHELN 479
           LIDI +RK AE +L    R+L+QRV +   A  +A+++L ++ K+ A+G ++  + H+ N
Sbjct: 274 LIDIHERKTAEESLLKFTRNLEQRVADEVEARLAAEEQLRQSQKLEAIGGLTGGVAHDFN 333

Query: 480 QPLTGLRTLLSSNELLLERGETQLLKANTKLVHSL--IDRMAAMTSQLKSFAFNRPDALQ 537
                L  +++ N  LL R E        ++  S+  ++R A ++SQL +FA  +P +  
Sbjct: 334 N----LLQVIAGNLHLLARHEPDNANVQRRVSASIAAVERGAKLSSQLLAFARRQPLS-P 388

Query: 538 AISLPDALQEILR--IHQARLTPVDVRVRLSSDLPLVMGEEQRLRQVLGNLVSNALDAMS 595
           A+  P  + E L   + +A    + ++V    D   +  +  +L   + NL  NA DAM+
Sbjct: 389 AVCDPRQIFEGLGELLQRALGETIQIKVTAPDDPWHLYVDRNQLENAILNLAINARDAMN 448

Query: 596 Q-----------TLEPKLSIS-AVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMG 643
                       TL+ K      +   D V V V+D G G++P++L   FEPF T+K  G
Sbjct: 449 GEGTIALSAENITLDRKFCAGKGIVAGDYVCVAVADTGVGMSPQVLAQAFEPFFTTKADG 508

Query: 644 EGLGLGLAIVANSLRDMQGSI 664
           +G GLGL++V   ++   G I
Sbjct: 509 QGTGLGLSMVFGFVKQSDGHI 529