Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., Signal transduction histidine kinase regulating C4-dicarboxylate transport system from Pseudomonas stutzeri RCH2

 Score =  153 bits (386), Expect = 3e-41
 Identities = 109/314 (34%), Positives = 169/314 (53%), Gaps = 19/314 (6%)

Query: 387 VETVARRSDGSLFPVLFSLIAVSWKDRRHYLVTL-IDISKRKKAEIALQNANRDLQQ--- 442
           V TV      +L  +L  L  +  + RRH+L  L +D   R++ E  +    RDL+    
Sbjct: 279 VRTVVAIGAATLLALLLWL-GLLMQRRRHFLERLALDAQARQQLEQRVLERTRDLEALNS 337

Query: 443 ----RVEERTAA---LKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNELL 495
                V ER  A   L  AQ EL++A K++ALG MS++I+HELNQPL  +R+   +  +L
Sbjct: 338 RLKVEVLEREQAQQELVRAQDELLQAGKLSALGTMSASISHELNQPLAAIRSYADNAGVL 397

Query: 496 LERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILRIHQAR 555
           L+       + N +L+  L  RMA++ + L++FA     A + ++L  AL + L +   R
Sbjct: 398 LDHQRNAEARDNLRLISELTARMASIIAHLRAFARRDQHAPERVALQPALDDALALLAKR 457

Query: 556 LTPVDVRVRLSSDLP----LVMGEEQRLRQVLGNLVSNALDAMSQTLEP-KLSISAVSEE 610
              +   V L  DLP     V   E RLRQ+L NL++NALDA+++   P ++ + A  + 
Sbjct: 458 RQAMG--VELIRDLPEATLWVQAGETRLRQILANLLANALDALTERPPPRRIWLRAEQQG 515

Query: 611 DQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNNP 670
           D V++ + DNG G + E L    EPF T+K   +GLGLGLAI     R + G +  +N+P
Sbjct: 516 DGVLLSLRDNGPGFSDEALQRAREPFFTTKTSAQGLGLGLAICDTLTRALGGELRMSNHP 575

Query: 671 DAGMSFEIRLRAAQ 684
           + G    + LR+A+
Sbjct: 576 EGGAQLSLFLRSAE 589



 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 27/307 (8%)

Query: 9   IVLVILLLIAVRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMTNEA 68
           + L+ LLL  + W    ++E +   +      Q L  Y++++  TL+R+  LP ++  + 
Sbjct: 15  LALLALLLAPLLWPLQQLAERYYRNELTEQNRQTLDLYVANLLGTLNRYEVLPRIL-GDL 73

Query: 69  NTLKLFQGDDRPQAQ--LQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSDG-- 124
             L+     D PQ +    + L +L         Y++   G+ L AS    NW   D   
Sbjct: 74  PALRAVLQQDSPQVRDNANRLLKRLRNQTGADVIYLMGTDGNTLAAS----NWDEEDSFV 129

Query: 125 ------KAIIHKILQQREGISIVTKSVGSTPTYFVAAPVYLDVEIVGAVAVQVDLNVLAD 178
                 +    + ++ R G      +      Y+  A V    +++G + V+VDL+    
Sbjct: 130 DRNFAFRPYFRQAMEGRLGRFFGLGTTSGKRGYYFGAAVRDGDQVLGVLVVKVDLDHTET 189

Query: 179 QWFASDELILFQNSQRHYFLSSSSVYSADWIATHPEVVAAAQKRSL-FDGTRLTLWQVEQ 237
            W ++ E +L  ++     L+S      +W       +   ++  + FD    TL+  + 
Sbjct: 190 LWGSTPEQLLVTDNFGVVILTSRP----EWRFRATRGLGVDEREQIAFDQPYPTLYPQDL 245

Query: 238 A----PYLAQSVTLDDLNWTLTYLTPLKNLN---ATVNWISTSAMVGVLLLLLLMRLRYE 290
                 +L QS  L +  WT+  L P+  +     TV  I  + ++ +LL L L+  R  
Sbjct: 246 TLNIDAWLIQSRELKETGWTVRILAPVNLVERPVRTVVAIGAATLLALLLWLGLLMQRRR 305

Query: 291 QYQKRLS 297
            + +RL+
Sbjct: 306 HFLERLA 312