Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 907 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  107 bits (267), Expect = 3e-27
 Identities = 76/249 (30%), Positives = 125/249 (50%), Gaps = 11/249 (4%)

Query: 442 QRVEERTAALKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLERGET 501
           Q V      ++ ++ +L +++KMA LG MS+ + HE+NQPL  +R  + +    L RG+ 
Sbjct: 650 QAVGRDNTDVRRSRMQLNQSAKMATLGEMSTGLAHEINQPLNVMRMAVVNVLKRLGRGDV 709

Query: 502 QLLKANTKL--VHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILRIHQARLTPV 559
            +     KL  + + + R A +   ++ F        Q      A++  + +    +   
Sbjct: 710 DIEYLTEKLNRIDTQVQRAARVVDHMRVFGRRSEVEEQLFDPAQAVEGTISMLAEGMKGK 769

Query: 560 DVRVRLSS--DLPLVMGEEQRLRQVLGNLVSNALDAM------SQTLEPKLSISAVSEED 611
            V++R+    D   V G   +L QVL NL+ NA DA+       +  EP +S+ A  +E+
Sbjct: 770 GVQLRVGGMIDAVRVRGHVDQLEQVLINLMVNARDALLSRREKDRDFEPWISVEAERDEN 829

Query: 612 QVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNNPD 671
            + + V DNG GI P LL  +FEPF T+K +G G GLGL+ V+  + D  G  ++  N  
Sbjct: 830 IIRLAVQDNGGGIDPRLLERIFEPFFTTKPVGVGTGLGLS-VSYGIVDQMGGQLSVANIG 888

Query: 672 AGMSFEIRL 680
            G  F+I L
Sbjct: 889 EGARFQIEL 897