Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., ATP-binding region, ATPase-like:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  154 bits (388), Expect = 1e-41
 Identities = 97/242 (40%), Positives = 144/242 (59%), Gaps = 3/242 (1%)

Query: 433 LQNANRD-LQQRVEERTAALKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSS 491
           L+  NRD L++ V+ERT  L +AQ  L++++K+AALG+MS+A+ HE+NQPLT  R  L++
Sbjct: 329 LRERNRDELERLVQERTRDLHTAQDGLVQSAKLAALGQMSAALAHEINQPLTAQRMQLAT 388

Query: 492 NELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDAL-QAISLPDALQEILR 550
             LLL++G           V   + RMAA+TS LK+FA   P  L + + L   + + L 
Sbjct: 389 LRLLLDQGRIDEACKALVPVDQQLTRMAALTSHLKTFARKSPSGLRERLDLATVVDQALL 448

Query: 551 IHQARLTPVDVRVRLSSDLPL-VMGEEQRLRQVLGNLVSNALDAMSQTLEPKLSISAVSE 609
           +   RL    V   L    P  V G+  RL QVL NL+ NALDAM +    +L +   + 
Sbjct: 449 LLDPRLREEHVDCILHLARPAWVRGDAIRLEQVLINLLRNALDAMRECRSRRLEVRIDAL 508

Query: 610 EDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNN 669
           ++Q  + V DNG GIA E L ++F+PF T+K +G+GLGLGLA+    + ++ G + A N+
Sbjct: 509 DNQWRLSVRDNGSGIAAENLPSIFDPFFTTKPVGDGLGLGLAVSYAIIHELGGQLTAQNH 568

Query: 670 PD 671
            D
Sbjct: 569 AD 570



 Score = 50.1 bits (118), Expect = 3e-10
 Identities = 82/352 (23%), Positives = 144/352 (40%), Gaps = 41/352 (11%)

Query: 1   MKLNKASW-IVLVILLLIAVRWGSHAVSENWQLRQAQRHG--------EQRLLDYISDVR 51
           M L    W I L +LL++A      A+     +RQAQRH         E +L  Y + + 
Sbjct: 1   MTLKHRYWRITLYVLLILA----GAALCAGLAMRQAQRHAMSEDAARAEGQLALYANTLH 56

Query: 52  RTLSRFYHLPYLMTNEANTLKLFQGDDRPQAQ--LQQQLAQLDKAANTKGWYILTLSGSL 109
             + R+  LP ++  +        G    + Q  L  +L +++ AA++    +L L G  
Sbjct: 57  TLIERYRALPSVLALDPEIRAALSGPVTGEVQNALNLKLEKINNAAHSSTLELLDLQGLA 116

Query: 110 LTASK-NAENWKLSDGKAIIHKILQQREGISIVTKSVGST---PTYFVAAPVYLDVE-IV 164
           + AS     N  +    A     LQ R   +    +VG T   P YF+++ V  D    +
Sbjct: 117 IGASNWRTPNSYVGHNYAFRPYFLQTRAKGTGRFYAVGVTTGIPGYFLSSAVLNDTGGFM 176

Query: 165 GAVAVQVDLNVLADQWFASDELILFQNSQRHYFLSSSSVY--------SADWIAT----- 211
           GA+ V+++   L  +W    +L+L  + +   F+++   +        S +  AT     
Sbjct: 177 GAMVVKLEFPSLEQEWDKGGDLLLVSDEKGIVFIANQPGWRYRELQPISVEDRATLLRTR 236

Query: 212 --HPEVVAAAQKRSLFDGTRLTLWQVEQAP-----YLAQSVTLDDLNWTLTYLTPLKNLN 264
               +V++  + R +   +  +       P     YL QS+ L D NWTL  L      +
Sbjct: 237 QYDKQVLSPLRSRVIDSFSENSHLSRVDGPDGTTDYLWQSLPLADENWTLHLLRKPPASS 296

Query: 265 ATVNWISTSAMVGVLLLLLLMRLRYEQYQ-KRLSEAKIQHVLFEAEERQRNM 315
             V     +A    L L+ L    Y++++  RL E     +    +ER R++
Sbjct: 297 EDVRNAGLAAAGIWLALVFLSLFLYQRWRLARLRERNRDELERLVQERTRDL 348