Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  169 bits (429), Expect = 3e-46
 Identities = 110/326 (33%), Positives = 173/326 (53%), Gaps = 31/326 (9%)

Query: 381 LADITNVETVARRSDGSLFPVLFSLIAVSWKDRRHYLVTLIDISKRKKAEIALQN-ANRD 439
           L D  +V T A  +  ++  +L  L A++       +  +I    R +  I +Q  A  +
Sbjct: 280 LTDTASVRTQALTTVAAVM-LLLCLAALA-------IAIIIQRRTRLRERILMQEQAQEE 331

Query: 440 LQQRVEERTA---------------------ALKSAQQELIEASKMAALGRMSSAITHEL 478
           L++RVEERTA                      L+  Q +LI+A K+A LG+MS+A++HE 
Sbjct: 332 LERRVEERTADLARVNSQIEAEIAERRLTEQQLRQTQADLIQAGKLAGLGQMSAALSHEF 391

Query: 479 NQPLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQA 538
           NQPL   +T   S  LL+ERG T     N + +  LIDRMA+++  L++FA    + L  
Sbjct: 392 NQPLAAAKTYADSAALLIERGRTAEASDNIRRISGLIDRMASISRHLRNFARKPNEKLGP 451

Query: 539 ISLPDALQEILRIHQARLTPVDVRVRLS-SDLPLVMGEEQRLRQVLGNLVSNALDAMSQT 597
           + L + +++ L I + RL      + +   D   V+    RL+QVL N++SNA DA+   
Sbjct: 452 VRLDEVVRDTLEIVETRLKAAGAEMDIDIGDELAVLAGSVRLQQVLVNVISNAADAVEGL 511

Query: 598 LEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSL 657
            + KLS+ A  E  + ++ V D G G+AP +   +F+PF T+K +G GLGLGL+I  N +
Sbjct: 512 DDRKLSVRAWREGGRAVLTVRDRGAGVAPAVAQRIFDPFYTTKGVGRGLGLGLSISYNII 571

Query: 658 RDMQGSIVATNNPDAGMSFEIRLRAA 683
           +D  GS+  +N+ + G  F I L  A
Sbjct: 572 KDFGGSLTVSNHSEGGAVFRIELALA 597



 Score = 49.7 bits (117), Expect = 4e-10
 Identities = 80/377 (21%), Positives = 156/377 (41%), Gaps = 44/377 (11%)

Query: 10  VLVILLLIA----VRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMT 65
           VL +LLL A    +     AV+    +++A       L   ++ +   L+R+  LP L+ 
Sbjct: 6   VLALLLLPAAAGLIAVQGTAVATRSYMQEASSQANTALRLAVAALSGHLNRYQALPALIA 65

Query: 66  NEANTLKLFQG--DDRPQAQLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSD 123
           +  +  +L     D R +  +   L ++++   +   Y++T  G+ + AS N +      
Sbjct: 66  DHDDVKELVTRPRDRRLRGAVNSYLKEINELLKSSDIYVITPDGNTIAAS-NYDGPTSFV 124

Query: 124 GKAIIHKILQQR--EGISIVTKSVGSTPT---YFVAAPVYLDVEIVGAVAVQVDLNVLAD 178
           G+   ++   Q   +G      ++G+T     Y+  APV +  EI G +  +VD+  +  
Sbjct: 125 GENFSYRPYFQDALKGDQSRFYALGTTSLKRGYYFGAPVRVGGEIRGVIVFKVDIETIEA 184

Query: 179 QWFASDELILFQNSQRHYFLSSSSVY-SADWIATHPEVVAAAQKRSLFDGTR-------- 229
            W   +  I   + +   F+S +  +  A  +   P+ +A  +    +   R        
Sbjct: 185 SWQGGEYRIFVSDPEGIIFMSGNPAWLYAGILPLTPDRLARTEGSRRYADARLRPLPAVQ 244

Query: 230 --------LTLWQVEQAPYLAQSVTLDDLNWTLTYLTPLKNLNATVNWISTSAMVGVLLL 281
                   L + +  +  YLA S  + + +WT+  LT      A+V   + + +  V+LL
Sbjct: 245 SELSGHRLLRVSEGSEREYLALSHYMPEADWTVNVLTD----TASVRTQALTTVAAVMLL 300

Query: 282 LLLMRLRYE---QYQKRLSEAKIQHVLFEAEERQRNMINKTHVGLLLIDGQGRIEEINPM 338
           L L  L      Q + RL E  +     +A+E     + +    L  ++ Q   E    +
Sbjct: 301 LCLAALAIAIIIQRRTRLRERILMQE--QAQEELERRVEERTADLARVNSQIEAE----I 354

Query: 339 AKRYFSLSDSMVRQLQA 355
           A+R   L++  +RQ QA
Sbjct: 355 AER--RLTEQQLRQTQA 369