Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., C4-dicarboxylate transport sensor protein from Sinorhizobium meliloti 1021

 Score =  127 bits (319), Expect = 2e-33
 Identities = 82/270 (30%), Positives = 147/270 (54%), Gaps = 15/270 (5%)

Query: 426 RKKAEIALQNANRDLQQ---RVE-------ERTAALKSAQQELIEASKMAALGRMSSAIT 475
           R   E +++   RDL+    R+E       + T  L++ QQ+L++A+++A LG++++ + 
Sbjct: 355 RNALEASVEERTRDLRMARDRLETEIADHRQTTEKLQAVQQDLVQANRLAILGQVAAGVA 414

Query: 476 HELNQPLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDA 535
           HE+NQP+  +R    +    L RG+T     N + +  L +R+ A+T +L+ FA     A
Sbjct: 415 HEINQPVATIRAYADNARTFLHRGQTVTAAENMESIAELTERVGAITDELRRFARKGHFA 474

Query: 536 LQAISLPDALQEILRIHQARLT-PVD-VRVRLSSDLPLVMGEEQRLRQVLGNLVSNALDA 593
               ++ + ++  L + ++R    +D +R+ L  D    +G   RL QVL NL+ NAL+A
Sbjct: 475 AGPTAMKEVVEGALMLLRSRFAGRMDAIRLDLPPDGLQALGNRIRLEQVLINLLQNALEA 534

Query: 594 MSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIV 653
           +  + +  + +        + + V+DNG GIA ++   +F PF TSK+  +GLGLGLAI 
Sbjct: 535 IGDSEDGAIQVRCEEAAGGIALTVADNGPGIAADVREELFTPFNTSKE--DGLGLGLAIS 592

Query: 654 ANSLRDMQGSIVATNNPDAGMSFEIRLRAA 683
              + D  G+I   + P +G +F + L+ A
Sbjct: 593 KEIVSDYGGTIEVESGP-SGTTFAVNLKKA 621



 Score = 35.4 bits (80), Expect = 8e-06
 Identities = 84/434 (19%), Positives = 169/434 (38%), Gaps = 45/434 (10%)

Query: 5   KASWIVLVILLLIAVRWGSHAVSENWQLRQAQRHGEQRLLDY---ISDVRRTLSRFYHLP 61
           + SW+V   + L+ +  G     +  + +       Q  +D     S +R  + R   LP
Sbjct: 24  RRSWLVFAAVALVLLAAGLLLARDYGRSQALAGLAGQSRIDASLKASLLRAVVERQRALP 83

Query: 62  YLMTNEANTLKLFQGDDRPQA-QLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWK 120
            ++ ++A         DRP   ++ ++L  L  +A     Y++  SG  + AS   E   
Sbjct: 84  LVLADDAAIRGALLSPDRPSLDRINRKLEALATSAEAAVIYLIDRSGVAVAASNWQEPTS 143

Query: 121 LSDGKAIIHKI--LQQREGIS--IVTKSVGSTPTYFVAAPVYLDVEIVGAVAVQVDLNVL 176
                        L  R+G++      +V + P  +++  V      +G +  +++ + +
Sbjct: 144 FVGNDYAFRDYFRLAVRDGMAEHFAMGTVSNRPGLYISRRVDGPGGPLGVIVAKLEFDGV 203

Query: 177 ADQWFASDELILFQNSQRHYFLSSSSVYSADWIATHP--EVVAAAQKRSLFDGTR----L 230
              W AS +      + R   +  +S+ S  ++ T P  E   A  + SL  G      L
Sbjct: 204 EADWQASGKPAYV--TDRRGIVLITSLPSWRFMTTKPIAEDRLAPIRESLQFGDAPLLPL 261

Query: 231 TLWQVEQAP-----------------YLAQSVTLDDLNWTLTYLTPLKNLNAT----VNW 269
              ++E  P                 +L     +   NW L  L+PLK   A        
Sbjct: 262 PFRKIEARPDGSSTLDALLPGDSTAAFLRVETMVPSTNWRLEQLSPLKAPLAAGAREAQL 321

Query: 270 ISTSAMVGVLLLLLLMRLRYEQYQKRLSEAKIQHVLFEA--EERQRNM-INKTHVGLLLI 326
           ++ +A+V +L L  L+  R +    R +E ++     EA  EER R++ + +  +   + 
Sbjct: 322 LTLAALVPLLALAALLLRRRQVVAMRSAEERLARNALEASVEERTRDLRMARDRLETEIA 381

Query: 327 DGQGRIEEINPMAKRYFSLSD-SMVRQLQAWSLFDTGNPNATVPLLLKN----LTEHQEL 381
           D +   E++  + +     +  +++ Q+ A    +   P AT+     N    L   Q +
Sbjct: 382 DHRQTTEKLQAVQQDLVQANRLAILGQVAAGVAHEINQPVATIRAYADNARTFLHRGQTV 441

Query: 382 ADITNVETVARRSD 395
               N+E++A  ++
Sbjct: 442 TAAENMESIAELTE 455