Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  104 bits (259), Expect = 1e-26
 Identities = 75/238 (31%), Positives = 123/238 (51%), Gaps = 15/238 (6%)

Query: 438 RDLQQRVE---ERTAALKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNEL 494
           R L+  +E   E   A    Q++   A ++   G M+S I+HEL QPL G+R L      
Sbjct: 344 RALETEIEQHRETQRAFNEQQRQFYRAQRVLLTGEMASGISHELKQPLAGIRYLAQGCLY 403

Query: 495 LLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILRIHQA 554
            L+  E ++  A   ++ + +DR     S+L+SF   +P      S+P  +  ++    A
Sbjct: 404 RLKDNEPEIASALGGVL-TQVDRAQETISRLRSFC-QQPSR----SVPYRVDTLIEETLA 457

Query: 555 RLTPVDVRVRLSSDLPLVMGEEQR----LRQVLGNLVSNALDAMSQTLEPKLSISAVSEE 610
            ++P   R++L   L L   E +     + QVL N++ NALDAM+    P L I+  +++
Sbjct: 458 LISPELKRLKLEPSLALTEVEARLDPGLMTQVLVNVLLNALDAMAGQPTPWLGIALEAKD 517

Query: 611 DQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATN 668
              ++RVSDNGCG+    L+ +F PF+++K   +GLGLG+ I    + +  G I A N
Sbjct: 518 SDYLIRVSDNGCGLTEAQLSRLFFPFESAK--ADGLGLGMVICKRIVEEHGGKISAQN 573