Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., C4-dicarboxylate transport sensor protein DctB from Phaeobacter inhibens DSM 17395

 Score =  121 bits (304), Expect = 8e-32
 Identities = 85/261 (32%), Positives = 137/261 (52%), Gaps = 16/261 (6%)

Query: 432 ALQNANRDLQQRVEERT---AALKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTL 488
           AL   N  L + V+ER    AALK AQQ+L++A K++ALG+MS+ I+HELNQPL  ++  
Sbjct: 325 ALSATNMRLTREVQERQEAEAALKRAQQDLVQAGKLSALGQMSAGISHELNQPLMAIQQY 384

Query: 489 LSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEI 548
             + E  + RG+ +    N   +  +  RMA +   L++FA N  + +  + L   +   
Sbjct: 385 AENGEAFVARGKPERAGENLGRIAQMAGRMARIIKNLRAFARNESEPMGRVDLGQVIASA 444

Query: 549 LRIHQARLTPVDVRVRLS--SDLPLVMGEEQRLRQVLGNLVSNALDAMSQTLEPKLSISA 606
           + + + RL      +     ++     G E RL QV  NL++NA DAM +  + ++ I+ 
Sbjct: 445 IELTEPRLRQDGAHLHWQPPAEPVFAWGGEVRLSQVFVNLINNAADAMLEQEQREIRIAI 504

Query: 607 VSEEDQ----VIVRVSDNGCGI-APELLTTMFEPFQTSKKMG--EGLGLGLAIVANSLRD 659
            +  D+    + V V D G G+  PE    +F+PF ++K +G  EG+GLGL+I    ++ 
Sbjct: 505 ETRHDEGDARLAVIVRDIGPGLKEPE---KIFDPFYSTKAVGSSEGMGLGLSISYGLVQS 561

Query: 660 MQGSIVATNNPDAGMSFEIRL 680
             G I   N  D G  F + L
Sbjct: 562 FGGHIRGVNTGD-GAEFTVEL 581



 Score = 42.4 bits (98), Expect = 6e-08
 Identities = 65/309 (21%), Positives = 118/309 (38%), Gaps = 26/309 (8%)

Query: 8   WIVLVILL--LIAVRWGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLPYLMT 65
           WI+L +LL  + AV  G + +     L          L      V   L  +  L  LM 
Sbjct: 12  WIILALLLGAVAAVAGGVYRLGYRQALDSLAERSAADLALASDRVTTQLQVYQELAVLMA 71

Query: 66  NEANTLKLFQGDDRPQAQ-LQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKLSDG 124
           +     +L + + R  AQ L +++A    A +    + +  +G ++ A++      ++  
Sbjct: 72  DHPTLKRLDRAEARVAAQGLLREVADKTAALDV---FFVDRAGRVVVAAEGVMGRDVTQ- 127

Query: 125 KAIIHKILQQREGISIVTKSVGSTPTYFVAAPVY-LDVEIVGAVAVQVDLNVLADQWFAS 183
               H+ +Q   G             Y  AAP + +D  + GA+ V  D+  +   W  S
Sbjct: 128 TGYFHRAMQGALGTGYGVLQPDGRRAYIYAAPDFDVDGRVRGALVVVADVEDVEQTWRGS 187

Query: 184 DELILFQNSQRHYFLSSSSVY-----SADWIATHPEVVAAAQKRSLFDGTRLTLWQVEQA 238
              + F N     F+++         SA+     P        RS  +G    +W +  +
Sbjct: 188 LPAVFFTNRGGEVFIANRRELLFWQRSAEGPGLSPPDGRQVALRSWLEGPH-EIWDLRWS 246

Query: 239 PYLA-----QSVTLDDLNWT---LTYLTPLKNLNATVNWISTSAMVGVLLLLLLMRLRYE 290
           PYL      Q+V L  +      L  + P + L      +  +AM  ++L L  M +   
Sbjct: 247 PYLPERALHQAVNLPQIGMVGEILVDVAPARRLAG----LQAAAMAAIVLALGAMLVLAI 302

Query: 291 QYQKRLSEA 299
           + ++ L+EA
Sbjct: 303 ERRRTLAEA 311