Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., C4-dicarboxylate transport sensor protein DctB from Phaeobacter inhibens DSM 17395

 Score =  164 bits (416), Expect = 8e-45
 Identities = 101/261 (38%), Positives = 156/261 (59%), Gaps = 10/261 (3%)

Query: 425 KRKKAEIALQNANRDLQQRVEERTA---ALKSAQQELIEASKMAALGRMSSAITHELNQP 481
           +R+ AE+ + NA   LQ+ + ER      L  A+Q L ++SK+AALG MS+A++HELNQP
Sbjct: 323 QRESAELRVLNAR--LQREIAERERMQETLAVAEQSLAQSSKLAALGEMSAAVSHELNQP 380

Query: 482 LTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPDALQAISL 541
           L  ++T L+   LLL R   +   A+   +  LI+RM A+T QLKS+A    DA   +++
Sbjct: 381 LAAMKTYLAGARLLLNRNRPEEALASFGRIDDLIERMGAITRQLKSYARKGGDAFSPVNM 440

Query: 542 PDALQEILRIHQARLTPVDVRV-RLSSDLPL-VMGEEQRLRQVLGNLVSNALDAMSQTLE 599
            DAL   L + + +L    V++ R+  + P+ VMG+  R+ QV+ NL+ NALDA     +
Sbjct: 441 GDALASSLSMMEPQLRQRHVKIARILPEQPVYVMGDRMRIEQVMVNLLRNALDATKSVAD 500

Query: 600 PKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVANSLRD 659
           P++ I   + E   +  V DNG GI      ++FEPF T+K+ G+G+GLGLAI +  + D
Sbjct: 501 PEVEILLAAGETATL-SVRDNGMGIKD--FGSLFEPFYTTKQPGDGVGLGLAISSGIVND 557

Query: 660 MQGSIVATNNPDAGMSFEIRL 680
           + G + A N  + G  FE++L
Sbjct: 558 LGGRLTARNGQNGGAVFEMQL 578



 Score = 40.4 bits (93), Expect = 2e-07
 Identities = 69/337 (20%), Positives = 126/337 (37%), Gaps = 31/337 (9%)

Query: 7   SWIV-LVILLLIAVR----WGSHAVSENWQLRQAQRHGEQRLLDYISDVRRTLSRFYHLP 61
           SW V L +L+L+AV     W ++    +      +   E RL  Y  ++   L R   +P
Sbjct: 20  SWRVRLALLVLMAVAAVTVWVTNRALTDRFTESTRNRAELRLALYSGNLVSELGRHAIVP 79

Query: 62  YLMTNEANTLKLFQGDDRPQAQLQQQLAQLDKAANTKGWYILTLSGSLLTASKNAENWKL 121
            L+  +   +   Q +D   +   Q+L    +        ++   G  + A+      + 
Sbjct: 80  QLLARDQALISALQSNDFSLST--QRLISFVEEIGAASIMLMAQDGRTVAATDRNRLGET 137

Query: 122 SDGKAIIHKILQQREGI-SIVTKSVGSTPTYFVAAPVYLDVE-IVGAVAVQVDLNVLADQ 179
               A     L+ +  + S +   VGS    F  +   +D   I+G + V+VDL      
Sbjct: 138 HRNAAYFVDALRSKTTVFSAIRTEVGSYR--FTYSRRIVDTSGILGVIVVEVDLQKFERA 195

Query: 180 WFASDELILFQNSQRHYFLSSSSVY------SADWIATHPEVVAAAQKRSLFDGTRL--- 230
           W    + ++  +S     L++ S +       A  + T PE       R+  D T L   
Sbjct: 196 WAGISDAVMVSDSTGTILLATESRWRGLSEEDALQLQT-PEGAIQRAIRATTDWTALPAD 254

Query: 231 TLWQVEQAPYLAQSVTLDDLNWTLTYLTPLKNLNATVNWISTSAMVGVLLLLLL------ 284
              Q E    L   +      W LT  T   ++   VN +    ++G  +LL L      
Sbjct: 255 AYLQGEAVMRLESRIPFQ--GWRLTSFTTYASIRERVNTVLALEIMGFAILLALAFYALS 312

Query: 285 --MRLRYEQYQKRLSEAKIQHVLFEAEERQRNMINKT 319
               LR   +Q+  +E ++ +   + E  +R  + +T
Sbjct: 313 RRTALRMALFQRESAELRVLNARLQREIAERERMQET 349