Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  120 bits (302), Expect = 1e-31
 Identities = 79/258 (30%), Positives = 134/258 (51%), Gaps = 11/258 (4%)

Query: 415 HYLVTLIDISKRKKAEIALQNANRDLQQRVEERTAALKSAQQELIEASKMAALGRMSSAI 474
           H+L     + KR +A       +++ Q+R+ E+       QQ+   A ++   G M+S I
Sbjct: 295 HHLRVKRLVKKRTQALSDEMTQHKNTQKRLFEQ-------QQQFYRAQRVLLTGEMASGI 347

Query: 475 THELNQPLTGLRTLLSSNELLLERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAFNRPD 534
            HELNQPL G+R L   +   L   +T+L  A +K++   +DR      + + F   +P 
Sbjct: 348 AHELNQPLAGIRYLAQGSIYRLLAQQTELQHALSKILQQ-VDRAQNTIKRFRQFC-QQPS 405

Query: 535 ALQAISLPDALQEILRIHQARLTPVDVRVRLSSDLPLVMGEEQRLRQVLGNLVSNALDAM 594
             Q   L + +Q+ L + Q     +D   +L      V  +   ++QV  NL+ NALDAM
Sbjct: 406 VYQDCDLKELIQDTLNLMQPDFKRIDFNPKLFLWPLTVTLDISLMQQVFVNLIRNALDAM 465

Query: 595 SQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAIVA 654
            +T +P+L+I+  ++ +  ++ VSD+G G++ + L  +F PF+TSK    GLGLG+ +  
Sbjct: 466 DETDDPQLAIAITNDSENAVIVVSDSGIGLSEQALERLFFPFETSK--ANGLGLGMVVCK 523

Query: 655 NSLRDMQGSIVATNNPDA 672
             + +  G I A NN +A
Sbjct: 524 RIVEEHGGKIRAFNNHEA 541