Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  129 bits (323), Expect = 4e-34
 Identities = 113/388 (29%), Positives = 180/388 (46%), Gaps = 44/388 (11%)

Query: 323 LLLIDGQGRIEEINPMAKRYFSLSDSMVRQLQAWSLFDTGNPNATVPLLLKNLTEHQELA 382
           L++ D  G IEE+NP  +RY    +  ++    + LF              + + H    
Sbjct: 77  LVVCDRHGAIEEVNPAFQRYTGRDEPTLKGTSIFDLFADDKARDKARSFFASHS-HDGAQ 135

Query: 383 DITNVETVARRSDGSLFPVLFSLIAVSWKDRRHYLVTLIDISKRKKAEIALQNANRDLQQ 442
           D   VE   +  DG   PV F+     W  R      LI +    +    L+ A R+L+Q
Sbjct: 136 D---VELPLQAEDGGAVPVSFN-----WTPRLSGTGKLIGMVVTGRPVGELRRAYRELRQ 187

Query: 443 RVEERTAALKSAQQELIEASKMAALGRMSSAITHELNQPLT--------------GLRTL 488
             E+    LK  QQ+L+ + KMA+LGR+ + + HELN P++               L T 
Sbjct: 188 THED----LKRTQQQLLHSEKMASLGRLVAGVAHELNNPISFVLGNVLALKRYAGRLETY 243

Query: 489 LSS------------NELLLERGETQLLKANTKLVHSLID---RMAAMTSQLKSFAFNRP 533
           L +             EL  E    ++L+  + L+  +I+   R   +   LK F+    
Sbjct: 244 LEAVHNRGCDCIPELEELRSELRIDRILEDMSPLIDGMIEGAERTRDIVDGLKRFSALDR 303

Query: 534 DALQAISLPDALQEILR-IHQARLTPVDVRVRLSSDLPLVMGEEQRLRQVLGNLVSNALD 592
           +A +  +L + +Q  +R + ++      VR  L ++LPL  G   +L+QV+ NLV NAL 
Sbjct: 304 EAAERFNLAEVVQRAVRWVAKSAPPSFTVRTELPAELPL-RGSPGQLQQVVMNLVQNALQ 362

Query: 593 AMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQTSKKMGEGLGLGLAI 652
           A +     +L IS    + ++ +   DNG GI  E L  +F+PF T+K +GEG GLGL+I
Sbjct: 363 ATAAQPGGELLISGELGDRELRLIFHDNGPGIPDEALGHLFDPFFTTKPVGEGTGLGLSI 422

Query: 653 VANSLRDMQGSIVATNNPDAGMSFEIRL 680
               +    G IVA+N+P+ G  F + L
Sbjct: 423 SYGIVERHGGRIVASNHPEGGAVFRLTL 450