Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (266), Expect = 2e-27
 Identities = 69/230 (30%), Positives = 117/230 (50%), Gaps = 5/230 (2%)

Query: 451 LKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLERGETQLLKANTKL 510
           L   QQ+   A ++   G M+S I HEL QPL G+R L       L+  + +L  A  K+
Sbjct: 358 LLEQQQQFYRAQRVLLTGEMASGIAHELKQPLAGIRYLTQGCLYRLDNTQAELATALNKV 417

Query: 511 VHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILRIHQARLTPVDVRVRLSSDLP 570
           + S +DR      +L++F     D  Q+  L   ++E L + Q     + +  +++    
Sbjct: 418 I-SQVDRAQTTIHRLRTFCQQTSD-YQSCDLRTVIEETLTLMQPEFQRLKLSPKVNLQAL 475

Query: 571 LVMGEEQRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLT 630
            V  +   ++QVL NL+ NALDAM    +  L I      + V + ++D GCG++   L 
Sbjct: 476 PVFADASLMQQVLVNLLRNALDAMESIPQKSLFIDTGITGENVYIHITDAGCGLSDSALK 535

Query: 631 TMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEIRL 680
            +F PF+TSK   +GLGLG+ I    + + +G I A ++ + G++ ++ L
Sbjct: 536 RLFFPFETSKP--QGLGLGMVICKRIIEEHKGKIEA-HHANPGLTIKVTL 582