Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  127 bits (318), Expect = 2e-33
 Identities = 111/400 (27%), Positives = 182/400 (45%), Gaps = 52/400 (13%)

Query: 292 YQKRLSEAKIQHVLFEAEERQRNMINKTHVGLLLIDGQ-GRIEEINPMAKRYFSLSDSMV 350
           Y+KRL E+         E + R++ +     + ++D + G I + NP A   +  +   +
Sbjct: 295 YRKRLQES---------EGKYRSLFDSGPDPIFVVDCERGTILDANPRAVEQYGYAREEL 345

Query: 351 RQLQAWSLFDTGNPNATVPLLLKNLTEHQELADITNVETVAR-RSDGSLFPVLFSLIAVS 409
             L    L   G+     P L     E        ++  VA+   DGS F V      +S
Sbjct: 346 VGLSFEKL--GGDAMRECPRLFD---EDSSPTGCVHLPKVAQYHKDGSTFWVNLHACPIS 400

Query: 410 WKDRRHYLVTLIDISKRKKAEIALQNANRDLQQRVEERTAALKSAQQELIEASKMAALGR 469
           ++ R   +V+  DI++  +                       K AQ  +++A+KM +LG 
Sbjct: 401 YRARPAIIVSTTDITEMLE-----------------------KDAQ--IVQAAKMKSLGE 435

Query: 470 MSSAITHELNQPLTGLRTLLSSNELLLERG---ETQLLKANTKLVHSLIDRMAAMTSQLK 526
           MS+ + HELNQPL  +R       + LE+G     + L+  T  +   +DR   + + L+
Sbjct: 436 MSAGVAHELNQPLNAIRMGSDYLNMALEQGLPVPPEQLREVTLDICGQVDRATEIINTLR 495

Query: 527 SFAFNRPDALQAISLPDALQEILRI--HQARLTPVDVRVRLSSDLPLVMGEEQRLRQVLG 584
           SF        + ++L   ++ +L +  HQ  L  V+  + L   LP V     RL+QV+ 
Sbjct: 496 SFGRKSEILEEPVNLNAPVRSVLLLVEHQFLLQNVEFELHLGDALPPVKAHNNRLQQVVF 555

Query: 585 NLVSNALDAMSQT------LEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPFQT 638
           N+++NA DA+ +       L  +++I+   E D V + V DNGCGI   L   +F+PF T
Sbjct: 556 NIITNARDAVIERMRRDAGLRGRITITTSHEGDTVTLSVKDNGCGIPATLREQVFQPFFT 615

Query: 639 SKKMGEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEI 678
           +K  G+G+GLGLAIV   +R   G I     P  G  F +
Sbjct: 616 TKATGQGMGLGLAIVYGIVRSYGGDIRIDGVPTGGTEFSL 655