Pairwise Alignments

Query, 684 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 603 a.a., ATPase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  142 bits (357), Expect = 6e-38
 Identities = 100/293 (34%), Positives = 152/293 (51%), Gaps = 14/293 (4%)

Query: 400 PVLFSLIAVSWKDRRHYLVTLIDI---SKRKKAEIALQNANRDLQQRVEERTA------- 449
           P+L S+ A+       YL+  + +   S+R++    +Q A   L+QRVEERT        
Sbjct: 302 PLLESMPALMLLSASIYLLLALGLLFSSERRRNLQRMQLAQSLLEQRVEERTQDLQQAND 361

Query: 450 ALKSAQQELIEASKMAALGRMSSAITHELNQPLTGLRTLLSSNELLLERGETQLLKANTK 509
            LK  Q ELI+A+K+  +G +S++I HELNQPL  LR+   + +  L R        N K
Sbjct: 362 RLKDTQDELIQAAKLTVIGSLSASINHELNQPLAALRSYAQNTQTFLARNMPDKASDNLK 421

Query: 510 LVHSLIDRMAAMTSQLKSFAFNRPDALQAISLPDALQEILRIHQARLTP--VDVRVRLSS 567
           ++  L DR+A +  Q KSF         A  L   +++ L I Q  +    V++ V L  
Sbjct: 422 IIIELTDRLADIVGQFKSFTRKSQGTDSATDLKGCIKQALTIVQPEIDKQGVELDVLLPE 481

Query: 568 DLPLVMGEEQRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPE 627
               V G++ RL+QV  N++SNA+ AM Q+ +  LSI  V+  D+  + + D+G G+   
Sbjct: 482 GQYQVWGDKVRLQQVFVNIMSNAIVAMQQSSKRTLSI-RVNCADKFCISIQDSGPGVRES 540

Query: 628 LLTTMFEPFQTSKKMGEGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEIRL 680
            +  +FEP+ T+ +   GLGLGL+I    +  MQG I   N  D G  F I L
Sbjct: 541 QMEKIFEPYFTTSER-TGLGLGLSISQRIIESMQGQINVANAEDGGAIFHIIL 592



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 62/326 (19%), Positives = 127/326 (38%), Gaps = 53/326 (16%)

Query: 34  QAQRHGEQRLLDYISDVRRTLSRFYHLPYLMTNEANTLKLFQGDDRPQ--AQLQQQLAQL 91
           + Q+  E++L + +S +   LSR+  +P++++       +      P+   +L   L ++
Sbjct: 40  EIQQQSERQLKELVSFLDGALSRYESIPHVLSTNPMLANVLNDQQNPKKVQELNLYLEEI 99

Query: 92  DKAANTKGWYILTLSGSLLTASKNAENWKLS--------DGKAIIHKILQQREGISIVTK 143
                    Y++   G  + AS    NW+ S          +      +    G      
Sbjct: 100 QHVTEASDIYLIDALGIAIAAS----NWQQSFSFIGKDYSFRPYYTDAISGNLGRYYAVG 155

Query: 144 SVGSTPTYFVAAPVYLD--VEIVGAVAVQVDLNVLAD-----------QWFASD-ELILF 189
           +      ++ + P+Y      I+GA+ V+VD+  +             Q+  SD + I+F
Sbjct: 156 TSSDKRGFYFSYPIYQQGAKGILGAIIVKVDIADIEQQSTSIAMAGQYQFLISDPDDIVF 215

Query: 190 QNS--------------QRHYFLSSSSVYSADWIATHPEVVAAAQKRSLFDGTRLTLWQV 235
            +S               + Y L++S  Y+   I     +    Q+ SL +G    ++Q+
Sbjct: 216 ISSVDEWRLASLTPLTQAKQYALNASKRYAERPIG-ELLIKPQYQEDSLSNG---HIYQI 271

Query: 236 ----EQAPYLAQSVTLDDLNWTLTYLTPLKNLNATVNWISTSAMVGVLLLLLLMRLRYEQ 291
                QA Y+     +    W +  L P+K L  ++  +   +   + LLL L  L   +
Sbjct: 272 RSGNSQAQYMDTHHLMTKAGWRVHILAPMKPLLESMPALMLLS-ASIYLLLALGLLFSSE 330

Query: 292 YQKRLSEAKIQHVLFE--AEERQRNM 315
            ++ L   ++   L E   EER +++
Sbjct: 331 RRRNLQRMQLAQSLLEQRVEERTQDL 356