Pairwise Alignments

Query, 452 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., putative regulatory protein UhpC (RefSeq) from Shewanella amazonensis SB2B

 Score =  194 bits (494), Expect = 4e-54
 Identities = 133/424 (31%), Positives = 215/424 (50%), Gaps = 23/424 (5%)

Query: 17  DKVDSVYSRLRWQLFIGIFVGYAGYYLVRKNFSLAMPYLIEQGF-SRGDLGVALGAVSIA 75
           +K+ S+Y + +WQ+F+G+ +GYA +Y+ R + ++A   +++ G  +  +LG+   A  + 
Sbjct: 19  EKIRSIYKKYQWQVFLGLVLGYAMFYVARMSLNVAKKPMLDAGIVTLDELGIIGSAFFLT 78

Query: 76  YGLSKFLMGNVSDRSNPRYFLSAGLLLSALVMFCFGFMPWATGSITAMFILLF-LNGWFQ 134
           Y + KF  G +SD +N   F+S  L LSA+     G       + T  FILL+ +NGWFQ
Sbjct: 79  YAVGKFSNGFLSDYANIGRFMSVSLGLSAITCLFMGM-----NTATFFFILLWAMNGWFQ 133

Query: 135 GMGWPACGRTMVHWWSRKERGEIVSVWNVAHNVGGGLIGPIFLLGLWMFNDDWRTAFYVP 194
            +G      ++  W+S K+RG + S+W  + N+G G+   +    +  F   WR  F   
Sbjct: 134 SVGSAPSCVSIFQWFSPKQRGSVYSIWGGSRNIGEGITWILTATVVSFFG--WRAGFVGA 191

Query: 195 AFFAVLVAVFTWLVMRDTPQSCGLP-PIEEYKNDYPDDYDKSHENEMTAKEIFFKYVFNN 253
                  A+  + V++D PQ+ GLP P   Y  D  +   K    E+   ++F   +   
Sbjct: 192 GIATFAAAIAMYFVLKDRPQTYGLPEPAVAYGED-AEIKKKVDPKEIRRAQLF---ILKQ 247

Query: 254 KLLWSIAIANAFVYLIRYGVLDWAPVYLKEAKHFTVDKSSWAYFLYEWAGIPGTLLCGWI 313
             +W IA+A A +Y+ RY +  WA +YL+E K +++  + +A   Y  AG  G +L G I
Sbjct: 248 PTVWIIALACAAMYISRYAMSSWAVLYLQEEKGYSLIDAGFAMSAYPIAGFAGAILAGII 307

Query: 314 SDKVFKGRRAPAGILFMVLVTLAVLVYWFNPAGNPAVDMAALVAIGFLIYG-PVMLIGLY 372
           SDKVF   R    +L+  L  +A L   F    +  +D  AL  IG+ I G  V L GL 
Sbjct: 308 SDKVFNANRHIPTLLY-GLANIAGLCLMFWGPQSRVMDAVALGLIGYAIGGLVVFLAGLT 366

Query: 373 ALELAPKKAAGTAAGLTGLFGYLGGA----VAANAILGYTVD---HFGWDGGFMVLVASC 425
           A +L PK A G   G  GL  Y+  +    V+A+ I  + VD   H+ +       +A+ 
Sbjct: 367 ACDLMPKTAVGAVKGFIGLCSYIAASAQEIVSASLIKIHEVDGVKHYDFSTAQYFWLAAA 426

Query: 426 VLSV 429
           V+S+
Sbjct: 427 VVSM 430