Pairwise Alignments

Query, 226 a.a., Crp/Fnr family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., cyclic nucleotide-binding domain (cNMP-BD) protein from Synechococcus elongatus PCC 7942

 Score = 42.7 bits (99), Expect = 6e-09
 Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 2/117 (1%)

Query: 20  PAFRLALAQCQTATKRFDAGEALLQQGQPVESLYVVSCGRVSMHIL-AANGRRFQLGEVQ 78
           PA    LA C    +   A EAL   G P  +LY +  GRV + +   +N +   L  V 
Sbjct: 15  PAELADLAHC-LQPQTLQAQEALFHCGDPAAALYWIRSGRVGVFVADGSNNQHESLLRVL 73

Query: 79  CDDHLFGEMEFFTAMPCQWNVVAEEPIQAMVICAQKLQECLEQQPVLSLFFASALAQ 135
               L GEM      P      A EP Q   + +Q  Q+ L + P       + L+Q
Sbjct: 74  GAGALLGEMALIDGQPRSATCRALEPTQLYAVTSQDFQQLLTRSPQFVQALLATLSQ 130