Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Transcriptional regulator, LacI family from Pseudomonas fluorescens FW300-N2E2

 Score =  179 bits (453), Expect = 1e-49
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 18/341 (5%)

Query: 1   MATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTK 60
           ++ ++++ARLAGVS +TVS  +     V  E  ++VN A +Q  Y P+ +A   +  RT 
Sbjct: 1   LSNIREVARLAGVSVATVSRTLKSPERVLPETRDKVNAAVEQAGYRPNLMAVQFRSRRTG 60

Query: 61  TIGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLL 120
            + +LV    N FF  V+ G +++    GY L+LC+T G  Q  +     +   + DG++
Sbjct: 61  NLVILVPAIANTFFARVISGAQQAAQAAGYRLLLCDTRGRAQIEREFAALVYAHQADGVI 120

Query: 121 LMCSTLEGERLDVFDRYPDIPIVVMDWGPILFASDKIQD--------NSLQGGYMAAKHL 172
                    +L   D +  +P  V    P++ A + +++        ++        +HL
Sbjct: 121 ---------QLRASDPFESMPAGVESL-PLVNACEVVKNAPYPTISLDNRAAAQAMTEHL 170

Query: 173 IECGHKEIGCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKL 232
           I  GH+ IG I GP        R  GY+ AL++AGIA++P  I   DF  + G      +
Sbjct: 171 IGLGHRRIGIIKGPRSSPLTLDRVAGYQDALSQAGIAVDPSLICHGDFTLKAGDDGAGAM 230

Query: 233 YQRGKLPSALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQP 292
                 PSALF  ND MA+G ++   Q GLRVP+D+SL+G+DD+  A +  P LTTI QP
Sbjct: 231 LALADRPSALFCENDEMAIGALRRIKQMGLRVPEDISLVGFDDIPFAAYCDPPLTTISQP 290

Query: 293 KYRLGKAAVDTLLYRLENPDTTAQVVQLEPTLVVRNSVRKL 333
               G+ AV  L+  +E      + V L   L VR S   L
Sbjct: 291 AEIFGEKAVQMLIALIEKKPIAERHVVLPFELTVRGSTAPL 331