Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Ribose operon repressor from Pseudomonas fluorescens FW300-N2E2

 Score =  265 bits (677), Expect = 1e-75
 Identities = 139/335 (41%), Positives = 222/335 (66%), Gaps = 6/335 (1%)

Query: 1   MATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTK 60
           MAT+KD+A LAG+S +TVSHV+NK+R VS+E+  +V  A ++L+Y PSA+ARSLK   T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIERLDYVPSAVARSLKAKTTA 60

Query: 61  TIGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLL 120
           TIG+LV  S NP+F E+ +G+E  C   GY +ILCN++ +  + ++ +  LL+KR+DGL+
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLI 120

Query: 121 LMCSTLEGERLDVFDRYPDI--PIVVMDWGPILFASDKIQDNSLQGGYMAAKHLIECGHK 178
              +   G  + + +   ++  P+V++D G     +D ++ +   G Y+A +HL+E GH+
Sbjct: 121 FASA---GGDVGLAEGLSNVRTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLELGHR 177

Query: 179 EIGCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGKL 238
           +I  I GP     AQMR  GY RAL EAGI +  + ++ESDF   GGY+A  +L  + + 
Sbjct: 178 DIAFIGGPANTSVAQMRLAGYCRALKEAGIELPVERMLESDFTSTGGYRAAAQLLVQ-QP 236

Query: 239 PSALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLGK 298
           PSA+F +NDM+ +GV++AA++R +RVP +LS+IG+DD+ +++++ PALTT+ Q   +LG+
Sbjct: 237 PSAIFAANDMIGIGVLRAAAERNVRVPSELSVIGFDDIQMSRYVYPALTTVGQSILQLGE 296

Query: 299 AAVDTLLYRLENPDTTAQVVQLEPTLVVRNSVRKL 333
            A + LL R+  P    +   + P++V+R S   L
Sbjct: 297 MAAEVLLRRIATPGLATEQRIVTPSIVLRESTAPL 331