Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  211 bits (538), Expect = 2e-59
 Identities = 118/330 (35%), Positives = 197/330 (59%), Gaps = 1/330 (0%)

Query: 1   MATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTK 60
           MAT+ D++ LAGVS +TVS V+N +  VSD+  ++V++A  +L+Y P+ +A+SL  NR+ 
Sbjct: 1   MATIYDVSFLAGVSLATVSRVVNNTGKVSDKTRQKVHDAMAKLDYRPNTIAQSLASNRSN 60

Query: 61  TIGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLL 120
           +IG+LV+    PF+G +++ VE +      ++I+     D  + K  +  LL +  D L+
Sbjct: 61  SIGVLVSQLDGPFYGPMMREVESALRAANKHVIIAAGHSDAAQEKDGVEFLLSRGCDALI 120

Query: 121 LMCSTLEGERLDVFDRYPDIPIVVMDWGPILFASDKIQDNSLQGGYMAAKHLIECGHKEI 180
           +    L    L    +    P+V+++          +  N+LQGG +A++H++E GHK+I
Sbjct: 121 VDAEILSNGYLVELCQ-GKTPVVLINRHVDGIDERCVHLNNLQGGLLASRHVLEKGHKQI 179

Query: 181 GCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGKLPS 240
             I+GPL +  A+ R EG+++ALAE GIA + +   E DF  EGGY+A  +L  RG+  +
Sbjct: 180 AYISGPLFKLDARERLEGHRQALAEQGIAFDENLFYEGDFREEGGYEAMAQLLSRGRDFT 239

Query: 241 ALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLGKAA 300
           A+  +ND MA G I    +RGLRVP+D+S +G+D++   ++++P LTT+  P   +G+ A
Sbjct: 240 AVVCANDQMASGAIAQCLERGLRVPEDISFVGFDNIPFPRYISPKLTTVCNPIQDMGRMA 299

Query: 301 VDTLLYRLENPDTTAQVVQLEPTLVVRNSV 330
              +L  + +        + EP LVVR+SV
Sbjct: 300 AHWVLREVYDQTDVTFCHRFEPELVVRDSV 329