Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  167 bits (424), Expect = 3e-46
 Identities = 97/310 (31%), Positives = 161/310 (51%), Gaps = 4/310 (1%)

Query: 1   MATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTK 60
           M  +K ++ LAGVST+TVS  +     VS++   +V  A +Q  Y P+ +A S+K  ++ 
Sbjct: 1   MTNIKKVSELAGVSTATVSRTLKSPERVSEQTRAKVMQAVKQAGYRPNWMATSVKTGKSN 60

Query: 61  TIGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLL 120
            I +LV    NPFF  +++G+E++   +GY ++L +T+G   R     + +L  R DGL+
Sbjct: 61  AIVVLVPNLVNPFFMRIIEGIEQAAQEKGYCVLLGDTQGLQAREHEYASMVLTNRADGLI 120

Query: 121 LMCSTL--EGERLDVFDRYPDIPIVVMDWGPILFASDKIQDNSLQGGYMAAKHLIECGHK 178
            +  +        D+    P + +     G   +   ++ +++   G   A HLI  GHK
Sbjct: 121 QLDHSFPFSDNDADLAATIPMVSVCERIEGDRKYPFIELDNHA--AGRALAHHLIGFGHK 178

Query: 179 EIGCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGKL 238
             G I G         R  G    L   GI    D +V S +  E G +   +L  R   
Sbjct: 179 HFGIIAGQRRSQIHHDRLTGIMSVLQGEGIDFKEDMLVGSSYSIETGIEGARELLSRNPR 238

Query: 239 PSALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLGK 298
           PSA+F  ND +A+G +     +GL++PDD+S+ G+D+V ++ +M P LTTI QP Y +G+
Sbjct: 239 PSAIFCFNDDIAIGAMFEIKSQGLKIPDDISVTGFDNVKVSAYMDPPLTTIDQPAYEMGR 298

Query: 299 AAVDTLLYRL 308
            AV+ L+ ++
Sbjct: 299 NAVEVLVQQI 308