Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., LacI family transcriptional regulator from Rahnella sp. WP5

 Score =  167 bits (423), Expect = 4e-46
 Identities = 106/335 (31%), Positives = 177/335 (52%), Gaps = 14/335 (4%)

Query: 3   TMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTKTI 62
           T+ DIARLA VS STVS VI     +S +  ERV +A + LNY PS LAR+L       I
Sbjct: 4   TIYDIARLAKVSKSTVSRVITNQTNISPDARERVLDAIRTLNYQPSKLARALTSKGFDAI 63

Query: 63  GMLVTTST-----NPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVD 117
            ++ T ST     NPFF E+++ +      +G+++IL  ++   + ++  +  + +K V 
Sbjct: 64  LVISTRSTKTTAGNPFFSEILQSIALRAEEEGFDVILQTSKNSEEDLQKCVAKITEKMVK 123

Query: 118 GLLLMCSTLEGERLDVFDRYPDIPIVVMDWGPILFASD---KIQDNSLQGGYMAAKHLIE 174
           G++++ S  +   L+  D Y  +P+VV+  G I         +  ++ Q  Y   +HLI 
Sbjct: 124 GVIMLSSPADEYILEQLDNY-QVPVVVI--GNIEGTYQHVFSVDTDNFQDSYRLTEHLIS 180

Query: 175 CGHKEIGCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQ 234
            GH++I C+  PL  H +  R  GYKRA+ +AG+   P  +V+  +  E  Y A   L Q
Sbjct: 181 LGHQDIACLHAPLDYHVSIDRLAGYKRAMQDAGLPAQPGLMVDGGYTTESAYLAATTLLQ 240

Query: 235 RGKLPSALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKY 294
           +   P+A+F ++ +  M + +AA ++   +PD++S+ GY   +I+  ++P LT I  P  
Sbjct: 241 KAHPPTAVFATDAVKVMSIYRAAHEQKKIIPDEMSITGYSSDNISPILSPGLTGIEIPIR 300

Query: 295 RLGKAAVDTLLYRL-ENPDTTAQVVQLEPTLVVRN 328
            LG      L  ++ + P   ++   L PT +V N
Sbjct: 301 ELGWQGCGVLFDKIFDRPGAHSRT--LVPTQLVVN 333