Pairwise Alignments

Query, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., DNA-binding transcriptional regulator CytR from Klebsiella michiganensis M5al

 Score =  211 bits (537), Expect = 2e-59
 Identities = 118/334 (35%), Positives = 197/334 (58%), Gaps = 5/334 (1%)

Query: 2   ATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTKT 61
           ATMKD+A+ A VST+TVS  +     VS     RV  AA ++ Y P +L R++K N ++T
Sbjct: 10  ATMKDVAQKANVSTATVSRALMNPDKVSQSTRNRVEQAALEVGYLPQSLGRNMKRNESRT 69

Query: 62  IGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLLL 121
           I ++V    +PFF E+++G+E +   Q Y +++ +    N++ K  I+ ++ K++DG+LL
Sbjct: 70  ILVIVPDICDPFFSEIIRGIEVTAAEQEYLVLIGDCAHQNRQEKTFIDLIITKQIDGMLL 129

Query: 122 MCSTLEGERLDVFDRYPDIPIVVM--DWGPILFASDKIQDNSLQGGYMAAKHLIECGHKE 179
           + S L  +     +   ++P +VM  ++ P L       DN L   + A  +L E GH+ 
Sbjct: 130 LGSRLPFDA--GVEEQRNLPPMVMANEFAPELELPTVHIDN-LTAAFNAVNYLHELGHRR 186

Query: 180 IGCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGKLP 239
           IGCI GP        R +GY +AL  +GI ++P +I   +F  E G  A E+L      P
Sbjct: 187 IGCIAGPEEMPLCHYRLQGYVQALRRSGITVDPHYIARGNFTYEAGASALEQLLALPVPP 246

Query: 240 SALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLGKA 299
           +A+F  +D+MA+G +  A +RGL+VP+DLS+IG+D++ +++F  P LTT+ QP++ +G+ 
Sbjct: 247 TAIFCHSDIMALGALSLAKRRGLKVPEDLSIIGFDNISLSEFCDPPLTTVAQPRFDIGRE 306

Query: 300 AVDTLLYRLENPDTTAQVVQLEPTLVVRNSVRKL 333
           A+  LL +L   + ++    L+  L+VR S RK+
Sbjct: 307 AMLLLLDQLHGHNVSSGSRLLDCELIVRGSTRKI 340