Pairwise Alignments

Query, 306 a.a., ribokinase from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., ribokinase (RefSeq) from Shewanella loihica PV-4

 Score =  271 bits (692), Expect = 2e-77
 Identities = 155/301 (51%), Positives = 194/301 (64%), Gaps = 3/301 (0%)

Query: 1   MNKLVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARMQAD---VGF 57
           M +L++LGS NADHV+ +   P  G+TL  R Y++  GGKGANQAVAAAR+  D   V F
Sbjct: 1   MTRLLILGSANADHVMNLEHLPSAGQTLMSRGYRLEHGGKGANQAVAAARLSKDETRVDF 60

Query: 58  IACVGDDSFGINIRESFKLDGINTAGVKLQPNCPTGIAMIQVSDSGENSICISAEANAKL 117
           I  +G D+ G  + ++++ DGI   G+    + PTG AMI V+D GEN I +SA ANA L
Sbjct: 61  ICHLGRDAIGQAMAQAWQQDGIMPYGITYTDDQPTGTAMIFVADKGENIIGVSAGANATL 120

Query: 118 TAAAIEPDLAAIRDARYLLMQLETPLDGILKAAQEAKTAKTNVILNPAPARELPDELLKC 177
           T  A+E  L  I  A YLL+QLETP   +L A + AK      ILNPAPA  +  +L + 
Sbjct: 121 TPEALEAHLELIEKADYLLVQLETPAVTVLDALKHAKKHGVTTILNPAPAMVIGKDLFRL 180

Query: 178 VDLITPNETEAEVLTGITVYDDSSAQQAADALHCKGIEIVIITLGSKGVWLSQNGRGQRI 237
           VD+ITPNETEAE +TGI V D+ SA+ AA  LH  G + VIITLG +G  LS       I
Sbjct: 181 VDVITPNETEAEAITGIEVTDEQSARMAAQMLHQFGPQTVIITLGKQGALLSTKDYCALI 240

Query: 238 PGFVVKATDTTAAGDTFNGALVTGLLQEMPLESAIKFAHAAAAISVTRFGAQTSIPTRAE 297
           PG  VKA DT AAGDTFNGAL+  L +   +E A+ FAH AAAISVTR GAQ +IP R E
Sbjct: 241 PGVQVKAVDTVAAGDTFNGALMVALGEGKSVEEAVAFAHRAAAISVTRAGAQRAIPYRHE 300

Query: 298 V 298
           +
Sbjct: 301 L 301