Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Inositol transport system sugar-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  128 bits (321), Expect = 2e-34
 Identities = 89/299 (29%), Positives = 155/299 (51%), Gaps = 9/299 (3%)

Query: 3   MKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKEL--GYNLI 60
           MK  T + S AL     S  A A   + + +S  ++ +   +++  + KAK L  G  L 
Sbjct: 1   MKTKTRIASLALSLMLTSGAALADLKIGVSMSQFDDTWLTYLRESMDKKAKSLPDGVTLQ 60

Query: 61  VLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRG 120
             D+++D  K+LS VE    + V AI++NP D+ A     + A  + IP++ ++R     
Sbjct: 61  FEDARSDVVKQLSQVESFISQKVDAIIVNPVDTAATQRITKAAVAAGIPLVYVNRRPDDL 120

Query: 121 EV---VSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAV-KG 176
           ++   V  +ASD++  G M   ++  K+G    ++ L G    ++   R +G  + + K 
Sbjct: 121 KLPAGVVTVASDDLEAGRMQMQYLAEKMGGKGDIVILLGDLANNSTTNRTKGVKDVLAKY 180

Query: 177 SKMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK---SV 233
             +++   Q   + R KG+ ++ + L    + QAV A NDEMA+GA  A++ +G    SV
Sbjct: 181 PNIKIEQEQTGTWLRDKGMTLVNDWLTQGREFQAVVANNDEMAIGAAMALKQAGTKKGSV 240

Query: 234 MIVGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVI 292
           +I G DGT DG+ A+++G +A +V Q         I+TA KM+K + VE  + V  ++I
Sbjct: 241 LIAGVDGTPDGLNAIKKGDMAVSVFQDAKGQADGSIDTAVKMVKKQPVEQSVWVPYRLI 299