Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  119 bits (299), Expect = 7e-32
 Identities = 75/226 (33%), Positives = 125/226 (55%), Gaps = 11/226 (4%)

Query: 51  KAKELGYNLIVLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPV 110
           +A+E G +L   D+Q     ++  +     +GV AIL+ P  +      +  A  ++IPV
Sbjct: 50  QAEERGIDLKFADAQQKQENQIKAIRSFIAQGVNAILLAPVVATGWDEVLEEAKDAEIPV 109

Query: 111 LTLDR--GASRGEVVSHIASDNVVGGEMAGHF-IEAKIGSDAKVIQLEGIAGTSAARERG 167
           + LDR   AS    ++ + SD V  G +AG + ++   G    V++L+G  G+S A +R 
Sbjct: 110 ILLDRTVDASDDLYLTAVTSDLVHEGSVAGKWLVDTVAGKPCNVVELQGTTGSSPAIDRK 169

Query: 168 EGFMNAVKGS-KMQLLASQPADFDRTKGLNVMENLLAA---NPDVQAVFAQNDEMALGAL 223
           +GF  A+ G+  ++++ SQ  DF RTKG  VME+ L A     ++ A++A ND+MA+GA+
Sbjct: 170 KGFEQALSGNDNLKIVRSQTGDFTRTKGKEVMESFLKAEDGGKNICALYAHNDDMAVGAI 229

Query: 224 RAIQAS----GKSVMIVGFDGTDDGIAAVERGQLAATVAQQPDMIG 265
           +AI+ +    GK +++V  D   D   A+  G+  ATV   P+M G
Sbjct: 230 QAIKEAGLKPGKDILVVSIDAVPDIFQAMAAGEANATVELTPNMAG 275