Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  150 bits (378), Expect = 4e-41
 Identities = 98/286 (34%), Positives = 154/286 (53%), Gaps = 8/286 (2%)

Query: 6   LTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIVLDSQ 65
           L TL++   L+   S      D +   L T  +PF++ + +  +A+AKE    L V  + 
Sbjct: 7   LKTLVAGTALTLLAS--GAFADGIGASLLTQQHPFYIELAEAMKAEAKEKNVALEVAIAN 64

Query: 66  NDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGEVVSH 125
            D +K+L++VED  V+GV  I+I+P DS  V  AI  A ++ I V+T+D  A+   V SH
Sbjct: 65  QDLNKQLADVEDFIVKGVDVIVISPVDSQGVRAAIAKAEKAGIKVITVDVPANGATVTSH 124

Query: 126 IASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAV-KGSKMQLLAS 184
           I +DN  GG  AG  +   +G+  KV  ++      +   R  GF  A+ K  +M+++A+
Sbjct: 125 IGTDNFTGGVKAGELMAEVLGNKGKVAIID-YPTVQSVVNRVNGFKEAIAKHPEMEIVAT 183

Query: 185 QPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASG--KSVMIVGFDGTD 242
           Q     R + L   +N+L ANPD+  +F   D+ AL A  A++A+G    V ++GFDG  
Sbjct: 184 Q-TGITRAEALAAAQNMLQANPDITGIFGFGDDAALAAAVAVKAAGLESQVKVIGFDGMK 242

Query: 243 DGIAAVERGQLAATVAQQ-PDMIGAIGIETADKMLKGEKVEAYIPV 287
           +   AV+   +   V QQ PD +G   I+TA K++ GE V A  P+
Sbjct: 243 EARDAVDGNPVMVGVIQQFPDQMGKQAIDTAVKVVAGETVPAEQPI 288