Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  152 bits (383), Expect = 1e-41
 Identities = 89/260 (34%), Positives = 146/260 (56%), Gaps = 12/260 (4%)

Query: 37  NNPFFVTMKDGAEAKAKELGYNLIVLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAV 96
           NNP+ +   +  +A+A++LG+ L+  D+    +K++++V  +  +GV  I + P +   +
Sbjct: 49  NNPWRIAQTNSMKAEAEKLGHQLVYTDAAGSAAKQVADVNSMIAQGVDLIFLAPREEKPL 108

Query: 97  SNAIRIANRSKIPVLTLDRG-----ASRGE-VVSHIASDNVVGGEMAGHFIEAKIGSDAK 150
             A+  A ++ IPV+ LDR      A  GE  V+ I SD +  G+    ++       +K
Sbjct: 109 IPAVMAAKKAGIPVILLDRSVDPSLAKAGEDYVTFIGSDFIEEGKRIAEWLVKNANGKSK 168

Query: 151 VIQLEGIAGTSAARERGEGFMNAVKGSK-MQLLASQPADFDRTKGLNVMENLLAANPDVQ 209
           +I+LEG  G+S A +R +GF   +K +   +++ASQ  DF R KG  V E LL A+PD  
Sbjct: 169 IIELEGTTGSSPANDRKKGFDETIKAAGGFEIVASQSGDFARDKGRQVAEALLQAHPDAD 228

Query: 210 AVFAQNDEMALGALRAIQAS----GKSVMIVGFDGTDDGIAAVERGQLAATVAQQPDMIG 265
            V+A NDEMA+GA+ AI+A+    GK V+++  DG  + + AV  G++AA V   P   G
Sbjct: 229 IVYAHNDEMAIGAIAAIEAAGKVPGKDVLVLSIDGGKEAVQAVIDGKIAAVVECNP-RFG 287

Query: 266 AIGIETADKMLKGEKVEAYI 285
               ET  +  KGEK++  +
Sbjct: 288 PKAFETMLRYAKGEKIDPMV 307