Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., rhizopine uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  137 bits (346), Expect = 2e-37
 Identities = 89/294 (30%), Positives = 159/294 (54%), Gaps = 16/294 (5%)

Query: 12  AALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKEL-GYNLIVLDSQNDPSK 70
           A L+ST     A   +T+ + ++  ++ F   ++ G +  AK L G  L V D+QND +K
Sbjct: 11  AVLMST-----AAHAETIGVSMALFDDNFLTVLRSGMQEYAKTLDGVELQVEDAQNDVAK 65

Query: 71  ELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGEVV----SHI 126
           + S +++    GV AI++NP D+DA +   +IA  + IP++ ++R     + +    + +
Sbjct: 66  QQSQIQNFIAAGVDAIIVNPVDTDATAAMSKIAADAGIPLVYVNREPVNVDTLPDKQAFV 125

Query: 127 ASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVKGSK---MQLLA 183
           AS+    G +    I   +G   K + + G     AAR R +   + +   +   ++++ 
Sbjct: 126 ASNEQESGTLQTKEICKMLGGKGKAVVMMGELSNQAARMRTKDIHDVIATDECKGIEIVE 185

Query: 184 SQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK---SVMIVGFDG 240
            Q A++ RT+G ++M N L+A  +  AV + NDEMA+GA++A++A+G+   SV+I G D 
Sbjct: 186 EQTANWSRTQGSDLMTNWLSAGLEFDAVISNNDEMAIGAIQALKAAGRSMDSVVIGGIDA 245

Query: 241 TDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVIAK 294
           T D +AA+  G L  TV Q     G   ++ A K+ KGE VE  + +  +++ K
Sbjct: 246 TQDALAAMAAGDLDVTVFQNAAGQGKGSVDAALKLAKGEPVEKKVYIPFELVTK 299